RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
LMNB1-201ENST00000261366 EPN3Q9H201 632 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 TMOD1P28289 359 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 PAK2Q13177 524 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 SLC35G1Q2M3R5 365 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 SWT1Q5T5J6 900 aaKnown RBP17.57■□□□□ 0.4
LMNB1-201ENST00000261366 NLRP14Q86W24 1093 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 SLC44A5Q8NCS7 719 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 KLRC1P26715 233 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 MECOMQ03112 1051 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 PTGISQ16647 500 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 ODF2Q5BJF6 829 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
LMNB1-201ENST00000261366 IQCKQ8N0W5 287 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 PIK3R5Q8WYR1 880 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 CAVIN3Q969G5 261 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 ROBO1Q9Y6N7 1651 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 RAD51CO43502 376 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 CYTH3O43739 400 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 EPB41P11171 864 aaKnown RBP17.56■□□□□ 0.4
LMNB1-201ENST00000261366 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
LMNB1-201ENST00000261366 FNTAP49354 379 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 CEP57Q86XR8 500 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 CCSER1Q9C0I3 900 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 FLT1P17948 1338 aa17.56■□□□□ 0.4
LMNB1-201ENST00000261366 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 NAPAP54920 295 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 AP1M1Q9BXS5 423 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 A0A1W2PQJ5 194 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 KCNQ2O43526 872 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 ECM2O94769 699 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 POLR2FP61218 127 aaKnown RBP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 RAPGEF1Q13905 1077 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 CAVIN4Q5BKX8 364 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 GJA10Q969M2 543 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 BIN2Q9UBW5 565 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 ADAMTS1Q9UHI8 967 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 COL1A1P02452 1464 aaPredicted RBP17.55■□□□□ 0.4
LMNB1-201ENST00000261366 ITGB4P16144 1822 aa17.55■□□□□ 0.4
LMNB1-201ENST00000261366 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 SIK1P57059 783 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 SPRED3Q2MJR0 410 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 KDM7AQ6ZMT4 941 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 MYMKA6NI61 221 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 MDH1P40925 334 aaKnown RBP17.54■□□□□ 0.4
LMNB1-201ENST00000261366 KCNQ4P56696 695 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 ITPK1Q13572 414 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 KIAA0753Q2KHM9 967 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CCDC13Q8IYE1 715 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 BAP1Q92560 729 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 ATP6V1G3Q96LB4 118 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 MKNK2Q9HBH9 465 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 GOLGA6L10A6NI86 522 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 KCNK3O14649 394 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
LMNB1-201ENST00000261366 MAN2A1Q16706 1144 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CCDC40Q4G0X9 1142 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 NELFCDQ8IXH7 590 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CRNKL1Q9BZJ0 848 aaKnown RBP17.54■□□□□ 0.4
LMNB1-201ENST00000261366 CCDC87Q9NVE4 849 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 TMEM260Q9NX78 707 aa17.54■□□□□ 0.4
LMNB1-201ENST00000261366 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
LMNB1-201ENST00000261366 POTEMA6NI47 508 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 PRLRP16471 622 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 CDK17Q00537 523 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-201ENST00000261366 PDXDC1Q6P996 788 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 SCLT1Q96NL6 688 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 SV2BQ7L1I2 683 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 FAM133AQ8N9E0 248 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 UBLCP1Q8WVY7 318 aaPredicted RBP17.53■□□□□ 0.4
LMNB1-201ENST00000261366 CALML4Q96GE6 196 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
LMNB1-201ENST00000261366 GDF3Q9NR23 364 aa17.53■□□□□ 0.4
LMNB1-201ENST00000261366 GOLGA6L7A0A1B0GV03 622 aa17.52■□□□□ 0.4
LMNB1-201ENST00000261366 TRAF5O00463 557 aa17.52■□□□□ 0.4
LMNB1-201ENST00000261366 ITIH3Q06033 890 aa17.52■□□□□ 0.4
LMNB1-201ENST00000261366 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
LMNB1-201ENST00000261366 EP400NLQ6ZTU2 488 aa17.52■□□□□ 0.4
LMNB1-201ENST00000261366 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
LMNB1-201ENST00000261366 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.4
LMNB1-201ENST00000261366 SLIT2O94813 1529 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms