RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ATP1A3P13637 1013 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 DHX8Q14562 1220 aaKnown RBP25.12■■□□□ 1.61
SIX3-201ENST00000260653 TMOD4Q9NZQ9 345 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 COL20A1Q9P218 1284 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 ESPNB1AK53 854 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 MYL1P05976 194 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 RBM10P98175 930 aaKnown RBP25.12■■□□□ 1.61
SIX3-201ENST00000260653 ECM1Q16610 540 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 FANCLQ9NW38 375 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 SPIRE1Q08AE8 756 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 TMEM119Q4V9L6 283 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 KLHL10Q6JEL2 608 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 KCNK18Q7Z418 384 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 CDCA5Q96FF9 252 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 STK17AQ9UEE5 414 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 PTPRFP10586 1907 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 ZFP91Q96JP5 570 aaPredicted RBP25.11■■□□□ 1.61
SIX3-201ENST00000260653 TRIM9Q9C026 710 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 EHMT1Q9H9B1 1298 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 RMND1Q9NWS8 449 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 CSADQ9Y600 493 aa25.11■■□□□ 1.61
SIX3-201ENST00000260653 PPP1R3GB7ZBB8 358 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 KLRC4O43908 158 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 ZC3H15Q8WU90 426 aaKnown RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 MRFAP1L1Q96HT8 127 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 ZC3H4Q9UPT8 1303 aaKnown RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 ERCC5P28715 1186 aaPredicted RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 MCM6Q14566 821 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 EAPPQ56P03 285 aaPredicted RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 MOB2Q70IA6 237 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 MCF2L2Q86YR7 1114 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 DRC7Q8IY82 874 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 ENOX1Q8TC92 643 aaKnown RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 LARP4BQ92615 738 aaKnown RBP25.1■■□□□ 1.61
SIX3-201ENST00000260653 FAM20AQ96MK3 541 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 NFE2L3Q9Y4A8 694 aa25.1■■□□□ 1.61
SIX3-201ENST00000260653 FDX1P10109 184 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 DSG3P32926 999 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 CCT6AP40227 531 aaKnown RBP25.09■■□□□ 1.61
SIX3-201ENST00000260653 KMT5BQ4FZB7 885 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 CATSPERGQ6ZRH7 1159 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 REPS2Q8NFH8 660 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 GDAQ9Y2T3 454 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 RBBP6Q7Z6E9 1792 aaKnown RBP25.09■■□□□ 1.61
SIX3-201ENST00000260653 CDC25BP30305 580 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 IREB2P48200 963 aaKnown RBP25.09■■□□□ 1.61
SIX3-201ENST00000260653 GHRHRQ02643 423 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 ZNF658Q5TYW1 1059 aaPredicted RBP25.09■■□□□ 1.61
SIX3-201ENST00000260653 ZSCAN30Q86W11 494 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 RIPK3Q9Y572 518 aa25.09■■□□□ 1.61
SIX3-201ENST00000260653 COG2Q14746 738 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 HSP90AA4PQ58FG1 418 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 SH3D19Q5HYK7 790 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 RBM46Q8TBY0 533 aaKnown RBP25.08■■□□□ 1.61
SIX3-201ENST00000260653 RAD54LQ92698 747 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 TRERF1Q96PN7 1200 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 C7orf25Q9BPX7 421 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 TAF1DQ9H5J8 278 aaPredicted RBP25.08■■□□□ 1.61
SIX3-201ENST00000260653 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.08■■□□□ 1.61
SIX3-201ENST00000260653 IFNKQ9P0W0 207 aa25.08■■□□□ 1.61
SIX3-201ENST00000260653 GRIN3BO60391 1043 aa25.08■■□□□ 1.6
SIX3-201ENST00000260653 STX17P56962 302 aa25.08■■□□□ 1.6
SIX3-201ENST00000260653 SV2BQ7L1I2 683 aa25.08■■□□□ 1.6
SIX3-201ENST00000260653 CLMNQ96JQ2 1002 aa25.08■■□□□ 1.6
SIX3-201ENST00000260653 ZNF830Q96NB3 372 aaPredicted RBP25.08■■□□□ 1.6
SIX3-201ENST00000260653 ADAMTS5Q9UNA0 930 aa25.08■■□□□ 1.6
SIX3-201ENST00000260653 SCN4AP35499 1836 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 KCNB1Q14721 858 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 CEP55Q53EZ4 464 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 HYIQ5T013 277 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 NCAPH2Q6IBW4 605 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 ELP3Q9H9T3 547 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 RRAGDQ9NQL2 400 aaPredicted RBP25.07■■□□□ 1.6
SIX3-201ENST00000260653 SYNRGQ9UMZ2 1314 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 KDM3AQ9Y4C1 1321 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 POTEB3A0JP26 581 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 POTECB2RU33 542 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 ASIC1P78348 528 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 FANCCQ00597 558 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 AMPD3Q01432 767 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 CT47A1Q5JQC4 288 aaPredicted RBP25.07■■□□□ 1.6
SIX3-201ENST00000260653 POTEBQ6S5H4 581 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 SLC30A10Q6XR72 485 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 SYTL5Q8TDW5 730 aaPredicted RBP25.07■■□□□ 1.6
SIX3-201ENST00000260653 XPO4Q9C0E2 1151 aaKnown RBP25.07■■□□□ 1.6
SIX3-201ENST00000260653 NRBP1Q9UHY1 535 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 VAV3Q9UKW4 847 aa25.07■■□□□ 1.6
SIX3-201ENST00000260653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.07■■□□□ 1.6
SIX3-201ENST00000260653 RPTORQ8N122 1335 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 NF2P35240 595 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 RPS6P62753 249 aaKnown RBP25.06■■□□□ 1.6
SIX3-201ENST00000260653 ZNF214Q9UL59 606 aaPredicted RBP25.06■■□□□ 1.6
SIX3-201ENST00000260653 CTNND2Q9UQB3 1225 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 MAPK8IP1Q9UQF2 711 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 MYMKA6NI61 221 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 MED24O75448 989 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 RHOBTB3O94955 611 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 SNRNP48Q6IEG0 339 aaKnown RBP25.06■■□□□ 1.6
SIX3-201ENST00000260653 IL31RAQ8NI17 732 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms