RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 IGHA2P01877 340 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 NR3C2P08235 984 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 CCND2P30279 289 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 NR5A1Q13285 461 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 KRT25Q7Z3Z0 450 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 IL31RAQ8NI17 732 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 CNPY2Q9Y2B0 182 aa23.59■■□□□ 1.37
RTCA-201ENST00000260563 INHAP05111 366 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 MYCLP12524 364 aaPredicted RBP23.58■■□□□ 1.36
RTCA-201ENST00000260563 SREBF1P36956 1147 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 STXBP2Q15833 593 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 CLEC17AQ6ZS10 378 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 NOSTRINQ8IVI9 506 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 GBP4Q96PP9 640 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 MCOLN1Q9GZU1 580 aa23.58■■□□□ 1.36
RTCA-201ENST00000260563 MYH15Q9Y2K3 1946 aa23.57■■□□□ 1.36
RTCA-201ENST00000260563 BAG4O95429 457 aaKnown RBP23.57■■□□□ 1.36
RTCA-201ENST00000260563 TRIM32Q13049 653 aa23.57■■□□□ 1.36
RTCA-201ENST00000260563 NONOQ15233 471 aaKnown RBP eCLIP23.57■■□□□ 1.36
RTCA-201ENST00000260563 PCNX4Q63HM2 1172 aa23.57■■□□□ 1.36
RTCA-201ENST00000260563 FAM173BQ6P4H8 233 aa23.57■■□□□ 1.36
RTCA-201ENST00000260563 ABHD16BQ9H3Z7 469 aa23.57■■□□□ 1.36
RTCA-201ENST00000260563 SNAI1O95863 264 aaPredicted RBP23.56■■□□□ 1.36
RTCA-201ENST00000260563 PRKAR2AP13861 404 aaKnown RBP23.56■■□□□ 1.36
RTCA-201ENST00000260563 PIK3AP1Q6ZUJ8 805 aa23.56■■□□□ 1.36
RTCA-201ENST00000260563 FBXO16Q8IX29 292 aaPredicted RBP23.56■■□□□ 1.36
RTCA-201ENST00000260563 TNFRSF25Q93038 417 aa23.56■■□□□ 1.36
RTCA-201ENST00000260563 VTA1Q9NP79 307 aa23.56■■□□□ 1.36
RTCA-201ENST00000260563 ZHX1Q9UKY1 873 aaPredicted RBP23.56■■□□□ 1.36
RTCA-201ENST00000260563 ARHGAP4P98171 946 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 DNM1Q05193 864 aaKnown RBP23.55■■□□□ 1.36
RTCA-201ENST00000260563 CACNB2Q08289 660 aaPredicted RBP23.55■■□□□ 1.36
RTCA-201ENST00000260563 XRRA1Q6P2D8 792 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 EEPD1Q7L9B9 569 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 CHAMP1Q96JM3 812 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 NRBP1Q9UHY1 535 aa23.55■■□□□ 1.36
RTCA-201ENST00000260563 STAM2O75886 525 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 CYBAP13498 195 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 TBCKQ8TEA7 893 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 DOCK5Q9H7D0 1870 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 EIF3JO75822 258 aaKnown RBP23.54■■□□□ 1.36
RTCA-201ENST00000260563 MRPS9P82933 396 aaKnown RBP23.54■■□□□ 1.36
RTCA-201ENST00000260563 ACVR2BQ13705 512 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 INF2Q27J81 1249 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 MAP3K21Q5TCX8 1036 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 KATNBL1Q9H079 304 aa23.54■■□□□ 1.36
RTCA-201ENST00000260563 KRT85P78386 507 aa23.53■■□□□ 1.36
RTCA-201ENST00000260563 EARS2Q5JPH6 523 aaKnown RBP23.53■■□□□ 1.36
RTCA-201ENST00000260563 PRAMEF19Q5SWL8 479 aa23.53■■□□□ 1.36
RTCA-201ENST00000260563 CRYGNQ8WXF5 182 aa23.53■■□□□ 1.36
RTCA-201ENST00000260563 ZNF396Q96N95 335 aaPredicted RBP23.53■■□□□ 1.36
RTCA-201ENST00000260563 CYP3A4P08684 503 aa23.52■■□□□ 1.36
RTCA-201ENST00000260563 ZNF865P0CJ78 1059 aaPredicted RBP23.52■■□□□ 1.36
RTCA-201ENST00000260563 ZNF76P36508 570 aa23.52■■□□□ 1.36
RTCA-201ENST00000260563 GNPTABQ3T906 1256 aa23.52■■□□□ 1.36
RTCA-201ENST00000260563 ZFP91Q96JP5 570 aaPredicted RBP23.52■■□□□ 1.36
RTCA-201ENST00000260563 FAM205CA6NFA0 338 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 ATL3Q6DD88 541 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 SEPT14Q6ZU15 432 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 NEK8Q86SG6 692 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 TRPV1Q8NER1 839 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 ARMC5Q96C12 935 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 HMX1Q9NP08 348 aaPredicted RBP23.51■■□□□ 1.35
RTCA-201ENST00000260563 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
RTCA-201ENST00000260563 NCLP19338 710 aaKnown RBP23.5■■□□□ 1.35
RTCA-201ENST00000260563 CNGA1P29973 690 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 CCND3P30281 292 aaPredicted RBP23.5■■□□□ 1.35
RTCA-201ENST00000260563 USP11P51784 963 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 RILPL1Q5EBL4 403 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 NLRX1Q86UT6 975 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 ZNF333Q96JL9 665 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 INPP4AQ96PE3 977 aaPredicted RBP23.5■■□□□ 1.35
RTCA-201ENST00000260563 CFAP45Q9UL16 551 aa23.5■■□□□ 1.35
RTCA-201ENST00000260563 AKR1A1P14550 325 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 CCDC144BQ3MJ40 725 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 TAPT1Q6NXT6 567 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 SCFD2Q8WU76 684 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 NOL7Q9UMY1 257 aaKnown RBP23.49■■□□□ 1.35
RTCA-201ENST00000260563 UBIAD1Q9Y5Z9 338 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 SEPT4O43236 478 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 RGS20O76081 388 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 ADCYAP1R1P41586 468 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 TTLL4Q14679 1199 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 LETM2Q2VYF4 491 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 CEP55Q53EZ4 464 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 COL13A1Q5TAT6 717 aaPredicted RBP23.49■■□□□ 1.35
RTCA-201ENST00000260563 GPRASP2Q96D09 838 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 USP28Q96RU2 1077 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 MXRA8Q9BRK3 442 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 PDGFCQ9NRA1 345 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 TFIP11Q9UBB9 837 aaKnown RBP23.49■■□□□ 1.35
RTCA-201ENST00000260563 MRVI1Q9Y6F6 885 aa23.49■■□□□ 1.35
RTCA-201ENST00000260563 BRCA2P51587 3418 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 MYCP01106 439 aaPredicted RBP23.48■■□□□ 1.35
RTCA-201ENST00000260563 ITGB5P18084 799 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 CIITAP33076 1130 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms