RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FOXN1O15353 648 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ITGB5P18084 799 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 MCM7P33993 719 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 CEBPZQ03701 1054 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 CCL14Q16627 93 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 PPP4R3AQ6IN85 833 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 XRRA1Q6P2D8 792 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 MOXD1Q6UVY6 613 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ARMCX2Q7L311 632 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 FLRT1Q9NZU1 646 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 SRRDQ9UH36 339 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 IGLV3-22A0A075B6J6 115 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 CYP3A7-CYP3A51PA0A087WV96 503 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 LOC102724159A0A0B4J2E5 919 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ASB14A6NK59 587 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 SLC37A4O43826 429 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 RGS20O76081 388 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 GCFC2P16383 781 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 CYP3A7P24462 503 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ZNF76P36508 570 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 PDE4DQ08499 809 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 PWP2Q15269 919 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 SF3A1Q15459 793 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 STXBP2Q15833 593 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 CEP55Q53EZ4 464 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 ANO1Q5XXA6 986 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 LENG9Q96B70 501 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 MXRA8Q9BRK3 442 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
CCDC90B-201ENST00000260054 LRRC37A2A6NM11 1700 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 B4DLN1 442 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 GNRH1P01148 92 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 HSPA8P11142 646 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 HOXD10P28358 340 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 PRR16Q569H4 304 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 MPHOSPH6Q99547 160 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 NAP1L4Q99733 375 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 TINF2Q9BSI4 451 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 WDR11Q9BZH6 1224 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 POLR3EQ9NVU0 708 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 MCM3APO60318 1980 aa17.95■□□□□ 0.46
CCDC90B-201ENST00000260054 MEIS1O00470 390 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 IGHA2P01877 340 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 NCLP19338 710 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 PTPAQ15257 358 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 Q4G0T1 1027 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 EEPD1Q7L9B9 569 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 INPP4AQ96PE3 977 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 JADE2Q9NQC1 790 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 HTTP42858 3142 aa17.94■□□□□ 0.46
CCDC90B-201ENST00000260054 EIF3JO75822 258 aaKnown RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 STAM2O75886 525 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 NASPP49321 788 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 KRT85P78386 507 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 ORC2Q13416 577 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 ARHGEF6Q15052 776 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 C4orf32Q8N8J7 132 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 CFAP45Q9UL16 551 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 SYNGAP1Q96PV0 1343 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 NEMFO60524 1076 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 ARP10275 920 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 PTGDRQ13258 359 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 IRF5Q13568 498 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 NIPA1Q7RTP0 329 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 LINC00301Q8NCQ3 95 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 TRIB2Q92519 343 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
CCDC90B-201ENST00000260054 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 CYP2C19P33261 490 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 SETQ01105 290 aaPredicted RBP17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 MTMR1Q13613 665 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 CLEC17AQ6ZS10 378 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 KCNH7Q9NS40 1196 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 TCHHQ07283 1943 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 CASP8AP2Q9UKL3 1982 aa17.92■□□□□ 0.46
CCDC90B-201ENST00000260054 MSH4O15457 936 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 FIBPO43427 364 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms