RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 CIDEBQ9UHD4 219 aa11.84□□□□□ -0.51
GCM1-201ENST00000259803 SH3GLB1Q9Y371 365 aa11.84□□□□□ -0.51
GCM1-201ENST00000259803 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
GCM1-201ENST00000259803 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
GCM1-201ENST00000259803 GAKO14976 1311 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
GCM1-201ENST00000259803 FSBPO95073 299 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 AP2B1P63010 937 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 KIRREL3Q8IZU9 778 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
GCM1-201ENST00000259803 MAELQ96JY0 434 aaKnown RBP11.83□□□□□ -0.52
GCM1-201ENST00000259803 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
GCM1-201ENST00000259803 DBF4Q9UBU7 674 aaPredicted RBP11.83□□□□□ -0.52
GCM1-201ENST00000259803 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 ZNF148Q9UQR1 794 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 GOLGA6L7A0A1B0GV03 622 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 A0A1B0GVG6 124 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 BIN1O00499 593 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 RASA4O43374 803 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 UBL4AP11441 157 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 BAG6P46379 1132 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 GNAQP50148 359 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 JDP2Q8WYK2 163 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 SLC39A13Q96H72 371 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 UBE2OQ9C0C9 1292 aaKnown RBP11.83□□□□□ -0.52
GCM1-201ENST00000259803 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
GCM1-201ENST00000259803 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
GCM1-201ENST00000259803 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
GCM1-201ENST00000259803 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
GCM1-201ENST00000259803 FUT4P22083 530 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 ETV3P41162 512 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 DR1Q01658 176 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 TRIM50Q86XT4 487 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 PREBQ9HCU5 417 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 KLC4Q9NSK0 619 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 KIAA1257Q9ULG3 409 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 TRIM43BA6NCK2 446 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 IFRD1O00458 451 aaPredicted RBP11.82□□□□□ -0.52
GCM1-201ENST00000259803 NMT2O60551 498 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 BAIAP3O94812 1187 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 RCAN1P53805 252 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 GPSM2P81274 684 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 DPYSQ14117 519 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 CWF19L2Q2TBE0 894 aaKnown RBP11.82□□□□□ -0.52
GCM1-201ENST00000259803 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 BZW1Q7L1Q6 419 aaKnown RBP11.82□□□□□ -0.52
GCM1-201ENST00000259803 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 ZNF653Q96CK0 615 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 PSKH2Q96QS6 385 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 FAM169AQ9Y6X4 670 aa11.82□□□□□ -0.52
GCM1-201ENST00000259803 TJP1Q07157 1748 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 GZMAP12544 262 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 MXI1P50539 228 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 TNIP1Q15025 636 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
GCM1-201ENST00000259803 CCDC153Q494R4 210 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 CCDC14Q49A88 953 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 KIAA1614Q5VZ46 1190 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 NEPROQ6NW34 567 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 CYP26C1Q6V0L0 522 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 OPTNQ96CV9 577 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 C16orf45Q96MC5 204 aaPredicted RBP11.81□□□□□ -0.52
GCM1-201ENST00000259803 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 ARPC4-TTLL3A0A0A6YYG9 625 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 SMIM24O75264 130 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 BASP1P80723 227 aaKnown RBP11.81□□□□□ -0.52
GCM1-201ENST00000259803 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 SPERTQ8NA61 448 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 IPCEF1Q8WWN9 437 aaPredicted RBP11.81□□□□□ -0.52
GCM1-201ENST00000259803 ARHGEF2Q92974 986 aaKnown RBP11.81□□□□□ -0.52
GCM1-201ENST00000259803 MRGBPQ9NV56 204 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 NDFIP2Q9NV92 336 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
GCM1-201ENST00000259803 ADCY5O95622 1261 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 WEE1P30291 646 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 SP140Q13342 867 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
GCM1-201ENST00000259803 ZNF746Q6NUN9 644 aaPredicted RBP11.8□□□□□ -0.52
GCM1-201ENST00000259803 LSMEM2Q8N112 164 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 EPS8L3Q8TE67 593 aaKnown RBP11.8□□□□□ -0.52
GCM1-201ENST00000259803 KCNF1Q9H3M0 494 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 STIM2Q9P246 746 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 RIMKLBQ9ULI2 386 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 ZSCAN12O43309 604 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 CASTP20810 708 aaKnown RBP11.8□□□□□ -0.52
GCM1-201ENST00000259803 PSMC4P43686 418 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 DYDC1Q8WWB3 177 aa11.8□□□□□ -0.52
GCM1-201ENST00000259803 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms