RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 GHRP10912 638 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 ATP2B2Q01814 1243 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 RASSF7Q02833 373 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 PDE4DQ08499 809 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 CUL1Q13616 776 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 EDEM3Q9BZQ6 932 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 ISCUQ9H1K1 167 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
TROAP-201ENST00000257909 HAUS2Q9NVX0 235 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 ABCB11O95342 1321 aa12.69□□□□□ -0.38
TROAP-201ENST00000257909 LRRC53A6NM62 1247 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 RBAK-RBAKDNI3L0D1 243 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 BUB1O43683 1085 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 DNAJC8O75937 253 aaPredicted RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 SCTRP47872 440 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 ASTE1Q2TB18 679 aaPredicted RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 KDM4CQ9H3R0 1056 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 PLCH1Q4KWH8 1693 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 MGRN1O60291 552 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 AGBL2Q5U5Z8 902 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 GKAP1Q5VSY0 366 aaPredicted RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 LRCH2Q5VUJ6 765 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 TLDC1Q6P9B6 456 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
TROAP-201ENST00000257909 ANKRD13CQ8N6S4 541 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
TROAP-201ENST00000257909 LAD1O00515 517 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 MYBP10242 640 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 HSD17B3P37058 310 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 SLC8A3P57103 927 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 MAN2A1Q16706 1144 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 CNNM4Q6P4Q7 775 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 BLIDQ8IZY5 108 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 H0YGN5 161 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 CES2O00748 559 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 KIF3CO14782 793 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 EPHB6O15197 1021 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 RAD51CO43502 376 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 SSBP05455 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
TROAP-201ENST00000257909 SLC1A4P43007 532 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 MTMR3Q13615 1198 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
TROAP-201ENST00000257909 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 ODF2Q5BJF6 829 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 CEP120Q8N960 986 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 BAP1Q92560 729 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 TATDN2Q93075 761 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
TROAP-201ENST00000257909 NFS1Q9Y697 457 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 DUOX1Q9NRD9 1551 aa12.67□□□□□ -0.38
TROAP-201ENST00000257909 PALMO75781 387 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 CTNNA1P35221 906 aaKnown RBP12.66□□□□□ -0.38
TROAP-201ENST00000257909 AMPD3Q01432 767 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 STK4Q13043 487 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 NAB2Q15742 525 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 QPCTQ16769 361 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 MEI1Q5TIA1 1274 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PDXDC1Q6P996 788 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
TROAP-201ENST00000257909 CACNA2D4Q7Z3S7 1137 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 RSRC1Q96IZ7 334 aaKnown RBP12.66□□□□□ -0.38
TROAP-201ENST00000257909 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
TROAP-201ENST00000257909 NEBLO76041 1014 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 GBP2P32456 591 aaPredicted RBP12.66□□□□□ -0.38
TROAP-201ENST00000257909 PRPHP41219 470 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 ASIC1P78348 528 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 ZNF844Q08AG5 666 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 SLC9C1Q4G0N8 1177 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
TROAP-201ENST00000257909 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms