RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
VRTN-201ENST00000256362 LRRC41Q15345 812 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 CNOT6LQ96LI5 555 aaKnown RBP12.86□□□□□ -0.35
VRTN-201ENST00000256362 FAM167BQ9BTA0 163 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 STIM2Q9P246 746 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 CALM1P0DP23 149 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 CALM2P0DP24 149 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 CALM3P0DP25 149 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 TXKP42681 527 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 AMPD2Q01433 879 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
VRTN-201ENST00000256362 EXOC1Q9NV70 894 aa12.86□□□□□ -0.35
VRTN-201ENST00000256362 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 SLIT2O94813 1529 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 VIMP08670 466 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 EPS15P42566 896 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 EPHB4P54760 987 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 KRT71Q3SY84 523 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 MGARPQ8TDB4 240 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 TBC1D7Q9P0N9 293 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 H7C1D1 291 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 EPHB6O15197 1021 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 NAPAP54920 295 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 LBHD1Q9BQE6 289 aaPredicted RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 VIPAS39Q9H9C1 493 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 DDAH1O94760 285 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 MYZAPP0CAP1 466 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 LLGL1Q15334 1064 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 TGFBRAP1Q8WUH2 860 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
VRTN-201ENST00000256362 NOVA2Q9UNW9 492 aaKnown RBP12.85□□□□□ -0.35
VRTN-201ENST00000256362 CEP104O60308 925 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 CABP7Q86V35 215 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
VRTN-201ENST00000256362 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 COL4A1P02462 1669 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 SEMA3EO15041 775 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 PPP1R37O75864 691 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 KIF5BP33176 963 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 RCSD1Q6JBY9 416 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 RSRC1Q96IZ7 334 aaKnown RBP12.84□□□□□ -0.35
VRTN-201ENST00000256362 NLRP3Q96P20 1036 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 OSBPL9Q96SU4 736 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
VRTN-201ENST00000256362 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 BCL9O00512 1426 aa12.84□□□□□ -0.35
VRTN-201ENST00000256362 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.35
VRTN-201ENST00000256362 PAK2Q13177 524 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 TRIM14Q14142 442 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.35
VRTN-201ENST00000256362 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 SPDL1Q96EA4 605 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.35
VRTN-201ENST00000256362 TMEM260Q9NX78 707 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 PCDHA6Q9UN73 950 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 PCDHA4Q9UN74 947 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 HYOU1Q9Y4L1 999 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 PCDHA8Q9Y5H6 950 aa12.83□□□□□ -0.35
VRTN-201ENST00000256362 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 CYTH3O43739 400 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
VRTN-201ENST00000256362 LONP1P36776 959 aaKnown RBP12.83□□□□□ -0.36
VRTN-201ENST00000256362 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 MDM1Q8TC05 714 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
VRTN-201ENST00000256362 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRTN-201ENST00000256362 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
VRTN-201ENST00000256362 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms