RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PCDHA12Q9UN75 941 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 FRMPD4Q14CM0 1322 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 PP2D1A8MPX8 630 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 ZNF76P36508 570 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 MRE11P49959 708 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 PRR16Q569H4 304 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 DHX58Q96C10 678 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 FAM20AQ96MK3 541 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 RBSNQ9H1K0 784 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 ACAD9Q9H845 621 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 GRPEL1Q9HAV7 217 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 HOOK1Q9UJC3 728 aaKnown RBP10.68□□□□□ -0.7
NIP7-202ENST00000254941 ZBTB48P10074 688 aaPredicted RBP10.67□□□□□ -0.7
NIP7-202ENST00000254941 CETPP11597 493 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 OSBPP22059 807 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 GTF2A2P52657 109 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 PLS1Q14651 629 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 KARSQ15046 597 aaKnown RBP10.67□□□□□ -0.7
NIP7-202ENST00000254941 CEP55Q53EZ4 464 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 SLC30A10Q6XR72 485 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 RIOX2Q8IUF8 465 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 CHST13Q8NET6 341 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 ERCC4Q92889 916 aaPredicted RBP10.67□□□□□ -0.7
NIP7-202ENST00000254941 CCDC34Q96HJ3 373 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 MMTAG2Q9BU76 263 aaKnown RBP10.67□□□□□ -0.7
NIP7-202ENST00000254941 BTBD7Q9P203 1132 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 LRWD1Q9UFC0 647 aa10.67□□□□□ -0.7
NIP7-202ENST00000254941 MEIS1O00470 390 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 MARCH6O60337 910 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 UBXN2AP68543 259 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 PNOCQ13519 176 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
NIP7-202ENST00000254941 POSTNQ15063 836 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 L1TD1Q5T7N2 865 aaKnown RBP10.66□□□□□ -0.7
NIP7-202ENST00000254941 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 PDXDC2PQ6P474 469 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 CABP7Q86V35 215 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SPATC1LQ9H0A9 340 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 CCDC39Q9UFE4 941 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SLC45A1Q9Y2W3 748 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 WDR81Q562E7 1941 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 POTEMA6NI47 508 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 FOXN1O15353 648 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 MSH4O15457 936 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SETQ01105 290 aaPredicted RBP10.66□□□□□ -0.7
NIP7-202ENST00000254941 SPIRE1Q08AE8 756 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 NAALADL2Q58DX5 795 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 NT5DC1Q5TFE4 455 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 RRAGBQ5VZM2 374 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SPRYD7Q5W111 196 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 SPATA20Q8TB22 786 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 GJA10Q969M2 543 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
NIP7-202ENST00000254941 PXMP2Q9NR77 195 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
NIP7-202ENST00000254941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
NIP7-202ENST00000254941 CCL15-CCL14A0A0B4J2E2 113 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 CNMDO75829 334 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 CAVIN2O95810 425 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 BCRP11274 1271 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 DEKP35659 375 aaKnown RBP10.65□□□□□ -0.7
NIP7-202ENST00000254941 STAT6P42226 847 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 HUNKP57058 714 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PGM5Q15124 567 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 STX1AQ16623 288 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 CCL15Q16663 113 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PLA2G4DQ86XP0 818 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 RASSF8Q8NHQ8 419 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 IL31RAQ8NI17 732 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 BRI3BPQ8WY22 251 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PAGE5Q96GU1 130 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 MXRA8Q9BRK3 442 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PDCD2LQ9BRP1 358 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 ANO10Q9NW15 660 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 RBPJLQ9UBG7 517 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PCDHA5Q9Y5H7 936 aa10.65□□□□□ -0.7
NIP7-202ENST00000254941 PFASO15067 1338 aa10.65□□□□□ -0.71
NIP7-202ENST00000254941 BTBD19C9JJ37 291 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 SLC26A4O43511 780 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 PEX10O60683 326 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 SLC25A27O95847 323 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 XRCC6P12956 609 aaKnown RBP eCLIP10.64□□□□□ -0.71
NIP7-202ENST00000254941 ITGB5P18084 799 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 PLCG1P19174 1290 aa10.64□□□□□ -0.71
NIP7-202ENST00000254941 SARSP49591 514 aaKnown RBP10.64□□□□□ -0.71
NIP7-202ENST00000254941 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
NIP7-202ENST00000254941 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms