RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 USP8P40818 1118 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 LMAN1P49257 510 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 SH3RF1Q7Z6J0 888 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 CLRN2A0PK11 232 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 CDR1P51861 262 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
CAPN7-201ENST00000253693 REXO1L1PQ8IX06 675 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 NHEJ1Q9H9Q4 299 aaPredicted RBP16.93■□□□□ 0.3
CAPN7-201ENST00000253693 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 COL4A3BPQ9Y5P4 624 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 CDKAL1Q5VV42 579 aa16.93■□□□□ 0.3
CAPN7-201ENST00000253693 MRPL11Q9Y3B7 192 aaKnown RBP16.93■□□□□ 0.3
CAPN7-201ENST00000253693 PHLPP1O60346 1717 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 ENC1O14682 589 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 GH2P01242 217 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 PLS1Q14651 629 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 GYPCP04921 128 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 XRCC5P13010 732 aaKnown RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 STK4Q13043 487 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 LMBR1Q8WVP7 490 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 ZBTB21Q9ULJ3 1066 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 TJP1Q07157 1748 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 CYTH3O43739 400 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 RAD9BQ6WBX8 426 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
CAPN7-201ENST00000253693 NUP98P52948 1817 aa16.92■□□□□ 0.3
CAPN7-201ENST00000253693 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
CAPN7-201ENST00000253693 L2HGDHQ9H9P8 463 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 JMJD4Q9H9V9 463 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 F5H6K3 240 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 SNAP25P60880 206 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 KLRC3Q07444 240 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 ZBTB9Q96C00 473 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 SELENOOQ9BVL4 669 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
CAPN7-201ENST00000253693 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 HLTFQ14527 1009 aaKnown RBP eCLIP16.91■□□□□ 0.3
CAPN7-201ENST00000253693 KBTBD4Q9NVX7 518 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 STAT2P52630 851 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 SKIDA1Q1XH10 827 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 CPXCR1Q8N123 301 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 CERKQ8TCT0 537 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 CENPHQ9H3R5 247 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 KCND1Q9NSA2 647 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 PCDHB13Q9Y5F0 798 aa16.91■□□□□ 0.3
CAPN7-201ENST00000253693 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
CAPN7-201ENST00000253693 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 ATP8B1O43520 1251 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
CAPN7-201ENST00000253693 CYP27A1Q02318 531 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 STRIP1Q5VSL9 837 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 PSMB7Q99436 277 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 CAPN11Q9UMQ6 739 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 MRFAP1Q9Y605 127 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 SLIT2O94813 1529 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 MEIS1O00470 390 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 NR2F2P24468 414 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
CAPN7-201ENST00000253693 E2F4Q16254 413 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 ZFYVE27Q5T4F4 411 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
CAPN7-201ENST00000253693 SEC31AO94979 1220 aaKnown RBP16.9■□□□□ 0.3
CAPN7-201ENST00000253693 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
CAPN7-201ENST00000253693 TNFRSF25Q93038 417 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 VPS18Q9P253 973 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 FAM184BQ9ULE4 1060 aa16.9■□□□□ 0.3
CAPN7-201ENST00000253693 USP11P51784 963 aa16.89■□□□□ 0.3
CAPN7-201ENST00000253693 ARHGAP4P98171 946 aa16.89■□□□□ 0.3
CAPN7-201ENST00000253693 ODF2Q5BJF6 829 aa16.89■□□□□ 0.3
CAPN7-201ENST00000253693 HPS3Q969F9 1004 aa16.89■□□□□ 0.3
CAPN7-201ENST00000253693 CALCOCO1Q9P1Z2 691 aa16.89■□□□□ 0.3
CAPN7-201ENST00000253693 E9PMD0 336 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 PHACTR2O75167 634 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 DDR1Q08345 913 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 TAF3Q5VWG9 929 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 PROM2Q8N271 834 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 NHSL1Q5SYE7 1610 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 CCDC151A5D8V7 595 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 WNT7AO00755 349 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 TADA3O75528 432 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 HOXA13P31271 388 aaPredicted RBP16.89■□□□□ 0.29
CAPN7-201ENST00000253693 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
CAPN7-201ENST00000253693 PRPF4BQ13523 1007 aaKnown RBP16.89■□□□□ 0.29
CAPN7-201ENST00000253693 AOC3Q16853 763 aa16.89■□□□□ 0.29
CAPN7-201ENST00000253693 METTL14Q9HCE5 456 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms