RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 BARHL2Q9NY43 387 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 IFNAR1P17181 557 aa27.98■■■□□ 2.07
SDF2L1-201ENST00000248958 BEX3Q00994 111 aa27.98■■■□□ 2.07
SDF2L1-201ENST00000248958 NTRK3Q16288 839 aa27.98■■■□□ 2.07
SDF2L1-201ENST00000248958 XRRA1Q6P2D8 792 aa27.98■■■□□ 2.07
SDF2L1-201ENST00000248958 CCDC62Q6P9F0 684 aa27.98■■■□□ 2.07
SDF2L1-201ENST00000248958 SCG2P13521 617 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 CCT2P78371 535 aaKnown RBP27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 IRX5P78411 483 aaPredicted RBP27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 TMEM63BQ5T3F8 832 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 CPLX2Q6PUV4 134 aaKnown RBP27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 CCDC12Q8WUD4 166 aaPredicted RBP27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 SEZ6LQ9BYH1 1024 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 EHMT1Q9H9B1 1298 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 POLR3EQ9NVU0 708 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 PCDH10Q9P2E7 1040 aa27.97■■■□□ 2.07
SDF2L1-201ENST00000248958 SPDYE3A6NKU9 549 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 STXBP3O00186 592 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 ARIH2O95376 493 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 TGFB3P10600 412 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 GNPTABQ3T906 1256 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 RIC8AQ9NPQ8 531 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 ATP11BQ9Y2G3 1177 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 MRVI1Q9Y6F6 885 aa27.96■■■□□ 2.07
SDF2L1-201ENST00000248958 MROH7Q68CQ1 1323 aa27.95■■■□□ 2.07
SDF2L1-201ENST00000248958 CPLX1O14810 134 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 KPNA6O60684 536 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 GH1P01241 217 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 TRIM60Q495X7 471 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 IL31RAQ8NI17 732 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 VTI1AQ96AJ9 217 aa27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 DDX41Q9UJV9 622 aaKnown RBP27.95■■■□□ 2.06
SDF2L1-201ENST00000248958 A0A0U1RQG5 324 aaPredicted RBP27.94■■■□□ 2.06
SDF2L1-201ENST00000248958 SMCO2A6NFE2 343 aa27.94■■■□□ 2.06
SDF2L1-201ENST00000248958 ADCY7P51828 1080 aa27.94■■■□□ 2.06
SDF2L1-201ENST00000248958 PCNX4Q63HM2 1172 aa27.94■■■□□ 2.06
SDF2L1-201ENST00000248958 TRIM22Q8IYM9 498 aa27.94■■■□□ 2.06
SDF2L1-201ENST00000248958 A6NJR5 290 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 FOSP01100 380 aaPredicted RBP27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 PTGS1P23219 599 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 LY6KQ17RY6 165 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 TYW1BQ6NUM6 668 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 COPS5Q92905 334 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 PHKBQ93100 1093 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 TOX2Q96NM4 488 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 SLC26A6Q9BXS9 759 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 NCOA5Q9HCD5 579 aaKnown RBP27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 PRKAG2Q9UGJ0 569 aa27.93■■■□□ 2.06
SDF2L1-201ENST00000248958 MYH7BA7E2Y1 1941 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 ESYT2A0FGR8 921 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 RGS20O76081 388 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 MRPS9P82933 396 aaKnown RBP27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 PKN1Q16512 942 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 UBE2SQ16763 222 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 CXCL17Q6UXB2 119 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 ANKRD33Q7Z3H0 272 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 EMID1Q96A84 441 aaPredicted RBP27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 SLKQ9H2G2 1235 aaPredicted RBP27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 ZMYND8Q9ULU4 1186 aaPredicted RBP27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 PCDHA6Q9UN73 950 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 PCDHA8Q9Y5H6 950 aa27.92■■■□□ 2.06
SDF2L1-201ENST00000248958 ARVCFO00192 962 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 ICAM3P32942 547 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 AK2P54819 239 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 SSRP1Q08945 709 aaKnown RBP27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 AP3B2Q13367 1082 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 LAMC2Q13753 1193 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 MCTP2Q6DN12 878 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 CCDC148Q8NFR7 591 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 INPP4AQ96PE3 977 aaPredicted RBP27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 LARP6Q9BRS8 491 aaKnown RBP27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 C6orf50Q9HD87 102 aa27.91■■■□□ 2.06
SDF2L1-201ENST00000248958 DCDC2CA8MYV0 355 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 CDKL5O76039 1030 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 GNA11P29992 359 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 CDK7P50613 346 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 NEK4P51957 841 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 TLE2Q04725 743 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 ARHGAP1Q07960 439 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 STK3Q13188 491 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 NLRX1Q86UT6 975 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 DHX37Q8IY37 1157 aaKnown RBP27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 ZMYND12Q9H0C1 365 aa27.9■■■□□ 2.06
SDF2L1-201ENST00000248958 FIBPO43427 364 aa27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 SYN1P17600 705 aa27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 PURAQ00577 322 aaKnown RBP27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 MTG1Q9BT17 334 aaPredicted RBP27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 SH3GLB2Q9NR46 395 aa27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 TPCN1Q9ULQ1 816 aa27.89■■■□□ 2.06
SDF2L1-201ENST00000248958 PFKFB2O60825 505 aa27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 DEXIO95424 95 aa27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 MYL3P08590 195 aa27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 CLK2P49760 499 aaKnown RBP27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 ITGA7Q13683 1181 aa27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 FAM177A1Q8N128 213 aaPredicted RBP27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 CDHR1Q96JP9 859 aa27.88■■■□□ 2.05
SDF2L1-201ENST00000248958 SPATA31C2B4DYI2 1134 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 TLR3O15455 904 aaKnown RBP27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 PQBP1O60828 265 aaKnown RBP27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 CLTBP09497 229 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms