RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 HMGB1P09429 215 aaKnown RBP24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 CPA1P15085 419 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 CCND2P30279 289 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 HSPA4P34932 840 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 SLC43A3Q8NBI5 491 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 CUL5Q93034 780 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 MTG1Q9BT17 334 aaPredicted RBP24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 PPP1R12CQ9BZL4 782 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 BRPF3Q9ULD4 1205 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 SNX14Q9Y5W7 946 aa24.4■■□□□ 1.5
HCFC1R1-201ENST00000248089 DOCK5Q9H7D0 1870 aa24.39■■□□□ 1.5
HCFC1R1-201ENST00000248089 A6NJR5 290 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 ZBTB43O43298 467 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 TIMP1P01033 207 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 CHMP4BP1P59074 171 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 FPGSQ05932 587 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 ARHGAP1Q07960 439 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 SHHQ15465 462 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 C9orf50Q5SZB4 431 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 SMARCC2Q8TAQ2 1214 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 AFG1LQ8WV93 481 aa24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 ZFP91Q96JP5 570 aaPredicted RBP24.39■■□□□ 1.49
HCFC1R1-201ENST00000248089 KLF18A0A0U1RQI7 1052 aa24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 CD4P01730 458 aa24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 RTN1Q16799 776 aa24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 FAM47CQ5HY64 1035 aa24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 TRPV6Q9H1D0 765 aa24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 RBM28Q9NW13 759 aaKnown RBP24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 DDX41Q9UJV9 622 aaKnown RBP24.38■■□□□ 1.49
HCFC1R1-201ENST00000248089 CNTNAP5Q8WYK1 1306 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 GOLGA8AA7E2F4 631 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 GOLGA8BA8MQT2 603 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 SORBS3O60504 671 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 B4GALT4O60513 344 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 MMP3P08254 477 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 ERICH6BQ5W0A0 696 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 USP17L6PQ6QN14 398 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 BLOC1S2Q6QNY1 142 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 HEATR3Q7Z4Q2 680 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 VSIG10LQ86VR7 867 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 PPP1R13LQ8WUF5 828 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 KCNB2Q92953 911 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 SEZ6LQ9BYH1 1024 aa24.37■■□□□ 1.49
HCFC1R1-201ENST00000248089 KPNA6O60684 536 aa24.36■■□□□ 1.49
HCFC1R1-201ENST00000248089 EPHB4P54760 987 aa24.36■■□□□ 1.49
HCFC1R1-201ENST00000248089 Q6ZUG5 572 aa24.36■■□□□ 1.49
HCFC1R1-201ENST00000248089 GPKOWQ92917 476 aaPredicted RBP eCLIP24.36■■□□□ 1.49
HCFC1R1-201ENST00000248089 ALDH8A1Q9H2A2 487 aaPredicted RBP24.36■■□□□ 1.49
HCFC1R1-201ENST00000248089 RGS20O76081 388 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 CYP2C18P33260 490 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 NBPF20Q3BBV1 942 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 MFSD5Q6N075 450 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 DHX37Q8IY37 1157 aaKnown RBP24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 HIPK3Q9H422 1215 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 FRMPD4Q14CM0 1322 aa24.35■■□□□ 1.49
HCFC1R1-201ENST00000248089 APOBRQ0VD83 1088 aa24.34■■□□□ 1.49
HCFC1R1-201ENST00000248089 RNPC3Q96LT9 517 aaKnown RBP24.34■■□□□ 1.49
HCFC1R1-201ENST00000248089 PSTPIP2Q9H939 334 aa24.34■■□□□ 1.49
HCFC1R1-201ENST00000248089 TRMT13Q9NUP7 481 aaKnown RBP24.34■■□□□ 1.49
HCFC1R1-201ENST00000248089 PIK3CDO00329 1044 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 MEIS2O14770 477 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 CASTP20810 708 aaKnown RBP24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 PPIGQ13427 754 aaKnown RBP eCLIP24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 LAMC2Q13753 1193 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 UBE2SQ16763 222 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 GNPTABQ3T906 1256 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 KCNV1Q6PIU1 500 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 TMEM199Q8N511 208 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 BRF1Q92994 677 aa24.33■■□□□ 1.49
HCFC1R1-201ENST00000248089 UMODL1Q5DID0 1318 aa24.33■■□□□ 1.48
HCFC1R1-201ENST00000248089 GGPS1O95749 300 aa24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 CSF2RAP15509 400 aa24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 UBA1P22314 1058 aaKnown RBP24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 RPS6KB1P23443 525 aa24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 METAP2P50579 478 aaKnown RBP eCLIP24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 MRPS9P82933 396 aaKnown RBP24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 DGKDQ16760 1214 aa24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 EMID1Q96A84 441 aaPredicted RBP24.32■■□□□ 1.48
HCFC1R1-201ENST00000248089 ZNF286BP0CG31 522 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 PSMA5P28066 241 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 CDC27P30260 824 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 WWC2Q6AWC2 1192 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 NFRKBQ6P4R8 1299 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 PPTC7Q8NI37 304 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 NOC4LQ9BVI4 516 aaKnown RBP24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 TANC1Q9C0D5 1861 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 RTEL1Q9NZ71 1219 aa24.31■■□□□ 1.48
HCFC1R1-201ENST00000248089 STAM2O75886 525 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 SUPT20HL2P0C7V6 817 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 CYP2C9P11712 490 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 RCAN1P53805 252 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 NAPAP54920 295 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 CCL23P55773 120 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 SP2Q02086 613 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 CELF3Q5SZQ8 465 aaKnown RBP24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 Q7L0L9 218 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 SPATA33Q96N06 139 aa24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 V9GY48 417 aaPredicted RBP24.3■■□□□ 1.48
HCFC1R1-201ENST00000248089 SCN5AQ14524 2016 aa24.29■■□□□ 1.48
HCFC1R1-201ENST00000248089 ACRP10323 421 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms