RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SETSIPP0DME0 302 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 ACTN3Q08043 901 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 FOXP4Q8IVH2 680 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 SLFN12Q8IYM2 578 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 HACE1Q8IYU2 909 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 CSRNP2Q9H175 543 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 CRYMQ14894 314 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 PCDHA5Q9Y5H7 936 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 PRR16Q569H4 304 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 TAB2Q9NYJ8 693 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 CNTNAP4Q9C0A0 1308 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 MEFVO15553 781 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 LPXNO60711 386 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 SLC8A3P57103 927 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 CCDC117Q8IWD4 279 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 METTL13Q8N6R0 699 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 DDX25Q9UHL0 483 aaKnown RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 COMMD10Q9Y6G5 202 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 SOWAHDA6NJG2 315 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 AOC3Q16853 763 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 LMBR1Q8WVP7 490 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
COPA-201ENST00000241704 CYP2D6P10635 497 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 TRPC3Q13507 836 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
COPA-201ENST00000241704 RNF169Q8NCN4 708 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 PANX2Q96RD6 677 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 PIGSQ96S52 555 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 PXDNQ92626 1479 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 ZNF609O15014 1411 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 IRAK1P51617 712 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 TMTC3Q6ZXV5 915 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 COG1Q8WTW3 980 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 IFT81Q8WYA0 676 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 PPANQ9NQ55 473 aaKnown RBP12.04□□□□□ -0.48
COPA-201ENST00000241704 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
COPA-201ENST00000241704 CHRNA5P30532 468 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 KRT9P35527 623 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 GPSM2P81274 684 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 APBA1Q02410 837 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 LONRF3Q496Y0 759 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 KCNG1Q9UIX4 513 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 MROH7-TTC4A0A0A0MT08 1334 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 ECE2O60344 883 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 AK8Q96MA6 479 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPA-201ENST00000241704 A0A0G2JLW4 131 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■■■□□ 15.4
COPA-201ENST00000241704 RFX1P22670 979 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 PRPHP41219 470 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 VWA3BQ502W6 1294 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 KCTD1Q719H9 257 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 DEFB132Q7Z7B7 95 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 SGMS1Q86VZ5 419 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 SIGLEC1Q9BZZ2 1709 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 NAIF1Q69YI7 327 aaPredicted RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 IFT20Q8IY31 132 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
COPA-201ENST00000241704 NSRP1Q9H0G5 558 aaKnown RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
COPA-201ENST00000241704 ZMYND10O75800 440 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 PLEKHA8P1O95397 391 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 ASNSP08243 561 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 CACNB3P54284 484 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 RAPGEF1Q13905 1077 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 PPP1R7Q15435 360 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 PRR5LQ6MZQ0 368 aa12.02□□□□□ -0.48
COPA-201ENST00000241704 INTS5Q6P9B9 1019 aaKnown RBP12.02□□□□□ -0.48
COPA-201ENST00000241704 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.48
COPA-201ENST00000241704 ENAHQ8N8S7 591 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms