RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 N4BP3O15049 544 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 POLR2MP0CAP2 368 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 HOXA13P31271 388 aaPredicted RBP26.01■■□□□ 1.75
MSX2-201ENST00000239243 RASSF7Q02833 373 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 PSMD2Q13200 908 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 CCDC174Q6PII3 467 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 FCHSD1Q86WN1 690 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 P2RX5Q93086 422 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 ZNF341Q9BYN7 854 aa26.01■■□□□ 1.75
MSX2-201ENST00000239243 BMP2KQ9NSY1 1161 aaPredicted RBP26.01■■□□□ 1.75
MSX2-201ENST00000239243 KIF2AO00139 706 aaPredicted RBP26■■□□□ 1.75
MSX2-201ENST00000239243 TEX33O43247 280 aa26■■□□□ 1.75
MSX2-201ENST00000239243 CTNND1O60716 968 aaKnown RBP26■■□□□ 1.75
MSX2-201ENST00000239243 COPB1P53618 953 aaKnown RBP26■■□□□ 1.75
MSX2-201ENST00000239243 STK4Q13043 487 aa26■■□□□ 1.75
MSX2-201ENST00000239243 PTPN14Q15678 1187 aa26■■□□□ 1.75
MSX2-201ENST00000239243 TTI2Q6NXR4 508 aa26■■□□□ 1.75
MSX2-201ENST00000239243 PPFIBP1Q86W92 1011 aa26■■□□□ 1.75
MSX2-201ENST00000239243 FRMD4AQ9P2Q2 1039 aaPredicted RBP26■■□□□ 1.75
MSX2-201ENST00000239243 WDR46O15213 610 aaKnown RBP26■■□□□ 1.75
MSX2-201ENST00000239243 ARHGAP6O43182 974 aa26■■□□□ 1.75
MSX2-201ENST00000239243 EGFRP00533 1210 aa26■■□□□ 1.75
MSX2-201ENST00000239243 ZNF76P36508 570 aa26■■□□□ 1.75
MSX2-201ENST00000239243 MAGEC2Q9UBF1 373 aaPredicted RBP26■■□□□ 1.75
MSX2-201ENST00000239243 TRIM49BA6NDI0 452 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 STX10O60499 249 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 COBLO75128 1261 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 CFBP00751 764 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 PTPN21Q16825 1174 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 E4F1Q66K89 784 aaPredicted RBP25.99■■□□□ 1.75
MSX2-201ENST00000239243 FAM114A1Q8IWE2 563 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 TC2NQ8N9U0 490 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 GJA10Q969M2 543 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 LENG9Q96B70 501 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 HOOK2Q96ED9 719 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 GLIS2Q9BZE0 524 aaPredicted RBP25.99■■□□□ 1.75
MSX2-201ENST00000239243 HACL1Q9UJ83 578 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 KIF4BQ2VIQ3 1234 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 NYAP1Q6ZVC0 841 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 SAMD7Q7Z3H4 446 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 MYRIPQ8NFW9 859 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 DDX12PQ92771 950 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 KIAA1683Q9H0B3 1180 aa25.99■■□□□ 1.75
MSX2-201ENST00000239243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.99■■□□□ 1.75
MSX2-201ENST00000239243 UQCRHLA0A096LP55 91 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 USP27XA6NNY8 438 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 AKR1B15C9JRZ8 316 aaPredicted RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 FAM86B1E9PN63 330 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 UQCRHP07919 91 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 TPM1P09493 284 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 FAM86B2P0C5J1 330 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 TBC1D10BQ4KMP7 808 aaPredicted RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 KCNK18Q7Z418 384 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 BAG1Q99933 345 aaPredicted RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 FCER1AP12319 257 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 PTGER2P43116 358 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 PMS1P54277 932 aaKnown RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 ECM1Q16610 540 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 DCAF15Q66K64 600 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 DYMQ7RTS9 669 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 CSGALNACT2Q8N6G5 542 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 PANX2Q96RD6 677 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 SRRTQ9BXP5 876 aaKnown RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 DEFB129Q9H1M3 183 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 TRMT1Q9NXH9 659 aaKnown RBP25.98■■□□□ 1.75
MSX2-201ENST00000239243 PAXBP1Q9Y5B6 917 aa25.98■■□□□ 1.75
MSX2-201ENST00000239243 TAL1P17542 331 aaPredicted RBP25.97■■□□□ 1.75
MSX2-201ENST00000239243 SPIRE1Q08AE8 756 aa25.97■■□□□ 1.75
MSX2-201ENST00000239243 TRIM14Q14142 442 aa25.97■■□□□ 1.75
MSX2-201ENST00000239243 PRPF38AQ8NAV1 312 aaKnown RBP25.97■■□□□ 1.75
MSX2-201ENST00000239243 KIAA0895Q8NCT3 520 aa25.97■■□□□ 1.75
MSX2-201ENST00000239243 KIAA1024Q9UPX6 916 aa25.97■■□□□ 1.75
MSX2-201ENST00000239243 TUBB4AP04350 444 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 LDHDQ86WU2 507 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 GUF1Q8N442 669 aaKnown RBP25.96■■□□□ 1.75
MSX2-201ENST00000239243 KCTD17Q8N5Z5 321 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 VPS16Q9H269 839 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 TAB2Q9NYJ8 693 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 IDEP14735 1019 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 CEP135Q66GS9 1140 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 IRF2BP1Q8IU81 584 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 TMEM139Q8IV31 216 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 RABGAP1Q9Y3P9 1069 aa25.96■■□□□ 1.75
MSX2-201ENST00000239243 ICAM1P05362 532 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 CCDC84Q86UT8 332 aaPredicted RBP25.95■■□□□ 1.75
MSX2-201ENST00000239243 CREBRFQ8IUR6 639 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 CNGA4Q8IV77 575 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 CCDC51Q96ER9 411 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 SLF1Q9BQI6 1058 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 NAA15Q9BXJ9 866 aaKnown RBP25.95■■□□□ 1.75
MSX2-201ENST00000239243 SLC39A2Q9NP94 309 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 FBXO28Q9NVF7 368 aa25.95■■□□□ 1.75
MSX2-201ENST00000239243 SCAF8Q9UPN6 1271 aaKnown RBP25.95■■□□□ 1.75
MSX2-201ENST00000239243 POTEB3A0JP26 581 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 POTECB2RU33 542 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 MSH4O15457 936 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 ADKP55263 362 aaKnown RBP25.95■■□□□ 1.74
MSX2-201ENST00000239243 CENPPQ6IPU0 288 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 POTEBQ6S5H4 581 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 APOBEC3FQ8IUX4 373 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms