RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 PDCD2LQ9BRP1 358 aa25.41■■□□□ 1.66
HOXB7-201ENST00000239165 TINF2Q9BSI4 451 aa25.41■■□□□ 1.66
HOXB7-201ENST00000239165 PCDHA6Q9UN73 950 aa25.41■■□□□ 1.66
HOXB7-201ENST00000239165 PCDHA8Q9Y5H6 950 aa25.41■■□□□ 1.66
HOXB7-201ENST00000239165 SPDYE3A6NKU9 549 aa25.4■■□□□ 1.66
HOXB7-201ENST00000239165 PDCP20941 246 aa25.4■■□□□ 1.66
HOXB7-201ENST00000239165 ANP32AP39687 249 aaKnown RBP25.4■■□□□ 1.66
HOXB7-201ENST00000239165 CHRDL2Q6WN34 429 aa25.4■■□□□ 1.66
HOXB7-201ENST00000239165 TMEM260Q9NX78 707 aa25.4■■□□□ 1.66
HOXB7-201ENST00000239165 KRT2P35908 639 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 ARHGEF16Q5VV41 709 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 LARP1BQ659C4 914 aaKnown RBP25.39■■□□□ 1.65
HOXB7-201ENST00000239165 CRYGNQ8WXF5 182 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 ANO3Q9BYT9 981 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 PRO3102Q9H379 93 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 BRMS1Q9HCU9 246 aa25.39■■□□□ 1.65
HOXB7-201ENST00000239165 RBM19Q9Y4C8 960 aaKnown RBP25.39■■□□□ 1.65
HOXB7-201ENST00000239165 B4DLN1 442 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 HSP90AA1P07900 732 aaKnown RBP25.38■■□□□ 1.65
HOXB7-201ENST00000239165 PGM5Q15124 567 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 JAKMIP3Q5VZ66 844 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 ARMCX2Q7L311 632 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 DIS3L2Q8IYB7 885 aaKnown RBP25.38■■□□□ 1.65
HOXB7-201ENST00000239165 RASGRP4Q8TDF6 673 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 OXER1Q8TDS5 423 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 FOXD4L1Q9NU39 408 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 NRBP1Q9UHY1 535 aa25.38■■□□□ 1.65
HOXB7-201ENST00000239165 SNAI1O95863 264 aaPredicted RBP25.37■■□□□ 1.65
HOXB7-201ENST00000239165 SREBF1P36956 1147 aa25.37■■□□□ 1.65
HOXB7-201ENST00000239165 PRAMEF19Q5SWL8 479 aa25.37■■□□□ 1.65
HOXB7-201ENST00000239165 XRRA1Q6P2D8 792 aa25.37■■□□□ 1.65
HOXB7-201ENST00000239165 MPHOSPH6Q99547 160 aaKnown RBP25.37■■□□□ 1.65
HOXB7-201ENST00000239165 KATNBL1Q9H079 304 aa25.37■■□□□ 1.65
HOXB7-201ENST00000239165 FOXP1Q9H334 677 aaPredicted RBP25.37■■□□□ 1.65
HOXB7-201ENST00000239165 EHMT1Q9H9B1 1298 aa25.37■■□□□ 1.65
HOXB7-201ENST00000239165 BTBD18B2RXH4 712 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 SEPT4O43236 478 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 NR3C2P08235 984 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 EIF2AK2P19525 551 aaKnown RBP25.36■■□□□ 1.65
HOXB7-201ENST00000239165 FOSBP53539 338 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 GUCY1B3Q02153 619 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 SAFBQ15424 915 aaKnown RBP eCLIP25.36■■□□□ 1.65
HOXB7-201ENST00000239165 PCNX4Q63HM2 1172 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 KRT25Q7Z3Z0 450 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 VSIG10LQ86VR7 867 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 LRRC37A2A6NM11 1700 aa25.36■■□□□ 1.65
HOXB7-201ENST00000239165 PDIA4P13667 645 aaKnown RBP25.35■■□□□ 1.65
HOXB7-201ENST00000239165 SYT1P21579 422 aa25.35■■□□□ 1.65
HOXB7-201ENST00000239165 U2AF2P26368 475 aaKnown RBP eCLIP25.35■■□□□ 1.65
HOXB7-201ENST00000239165 NR5A1Q13285 461 aa25.35■■□□□ 1.65
HOXB7-201ENST00000239165 C7orf61Q8IZ16 206 aa25.35■■□□□ 1.65
HOXB7-201ENST00000239165 IL31RAQ8NI17 732 aa25.35■■□□□ 1.65
HOXB7-201ENST00000239165 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.35■■□□□ 1.65
HOXB7-201ENST00000239165 STAM2O75886 525 aa25.34■■□□□ 1.65
HOXB7-201ENST00000239165 CYP3A4P08684 503 aa25.34■■□□□ 1.65
HOXB7-201ENST00000239165 FXR1P51114 621 aaKnown RBP eCLIP25.34■■□□□ 1.65
HOXB7-201ENST00000239165 PGBD1Q96JS3 809 aa25.34■■□□□ 1.65
HOXB7-201ENST00000239165 TRIOBPQ9H2D6 2365 aa25.34■■□□□ 1.65
HOXB7-201ENST00000239165 DNM1LO00429 736 aa25.33■■□□□ 1.65
HOXB7-201ENST00000239165 EDIL3O43854 480 aa25.33■■□□□ 1.65
HOXB7-201ENST00000239165 MRPS9P82933 396 aaKnown RBP25.33■■□□□ 1.65
HOXB7-201ENST00000239165 STXBP2Q15833 593 aa25.33■■□□□ 1.65
HOXB7-201ENST00000239165 ABHD16BQ9H3Z7 469 aa25.33■■□□□ 1.65
HOXB7-201ENST00000239165 RANBP2P49792 3224 aaKnown RBP25.32■■□□□ 1.64
HOXB7-201ENST00000239165 H3BQV1 296 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 EIF3JO75822 258 aaKnown RBP25.32■■□□□ 1.64
HOXB7-201ENST00000239165 CCND2P30279 289 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 ARHGAP4P98171 946 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 PDE4DQ08499 809 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 NONOQ15233 471 aaKnown RBP eCLIP25.32■■□□□ 1.64
HOXB7-201ENST00000239165 LRRC26Q2I0M4 334 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 EARS2Q5JPH6 523 aaKnown RBP25.32■■□□□ 1.64
HOXB7-201ENST00000239165 ANO1Q5XXA6 986 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 VTA1Q9NP79 307 aa25.32■■□□□ 1.64
HOXB7-201ENST00000239165 DDX49Q9Y6V7 483 aaKnown RBP25.32■■□□□ 1.64
HOXB7-201ENST00000239165 KIF28PB7ZC32 967 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 ZNF865P0CJ78 1059 aaPredicted RBP25.31■■□□□ 1.64
HOXB7-201ENST00000239165 CIITAP33076 1130 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 USP11P51784 963 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 ARRDC4Q8NCT1 418 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 TBCKQ8TEA7 893 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 INPP4AQ96PE3 977 aaPredicted RBP25.31■■□□□ 1.64
HOXB7-201ENST00000239165 DNAH12Q6ZR08 3092 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 MCM3APO60318 1980 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 CCDC194A0A1B0GVG4 234 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 RBM47A0AV96 593 aaKnown RBP25.31■■□□□ 1.64
HOXB7-201ENST00000239165 STX6O43752 255 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 PIK3AP1Q6ZUJ8 805 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 NOSTRINQ8IVI9 506 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 SPRYD3Q8NCJ5 442 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 SENP6Q9GZR1 1112 aaPredicted RBP25.31■■□□□ 1.64
HOXB7-201ENST00000239165 ZMYND8Q9ULU4 1186 aaPredicted RBP25.31■■□□□ 1.64
HOXB7-201ENST00000239165 MTMR6Q9Y217 621 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 CNPY2Q9Y2B0 182 aa25.31■■□□□ 1.64
HOXB7-201ENST00000239165 RGS20O76081 388 aa25.3■■□□□ 1.64
HOXB7-201ENST00000239165 ACVR2BQ13705 512 aa25.3■■□□□ 1.64
HOXB7-201ENST00000239165 GJC2Q5T442 439 aaPredicted RBP25.3■■□□□ 1.64
HOXB7-201ENST00000239165 TAPT1Q6NXT6 567 aa25.3■■□□□ 1.64
HOXB7-201ENST00000239165 UBIAD1Q9Y5Z9 338 aa25.3■■□□□ 1.64
HOXB7-201ENST00000239165 MOXD1Q6UVY6 613 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms