RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
SF3B6-201ENST00000233468 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 RARBP10826 455 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 HSD17B4P51659 736 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 SLC30A10Q6XR72 485 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 EHMT1Q9H9B1 1298 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
SF3B6-201ENST00000233468 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
SF3B6-201ENST00000233468 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 PFKFB2O60825 505 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
SF3B6-201ENST00000233468 SCG2P13521 617 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 NAPAP54920 295 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 FUT2Q10981 343 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 STK3Q13188 491 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 STXBP2Q15833 593 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
SF3B6-201ENST00000233468 PRAMEF19Q5SWL8 479 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 MCTP2Q6DN12 878 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
SF3B6-201ENST00000233468 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 MORC4Q8TE76 937 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
SF3B6-201ENST00000233468 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 SPC25Q9HBM1 224 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 BARHL2Q9NY43 387 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 TPCN1Q9ULQ1 816 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.33
SF3B6-201ENST00000233468 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 DEXIO95424 95 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 ZNF865P0CJ78 1059 aaPredicted RBP12.95□□□□□ -0.34
SF3B6-201ENST00000233468 XBP1P17861 261 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 GNA11P29992 359 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 IQSEC1Q6DN90 963 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 WASF1Q92558 559 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 FGD4Q96M96 766 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
SF3B6-201ENST00000233468 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 STAM2O75886 525 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 EDNRBP24530 442 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 MCM2P49736 904 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 ADCY7P51828 1080 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 RTP1P59025 263 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 NTRK3Q16288 839 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 NOL8Q76FK4 1167 aaKnown RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 PHKBQ93100 1093 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 TAAR1Q96RJ0 339 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
SF3B6-201ENST00000233468 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
SF3B6-201ENST00000233468 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 STXBP3O00186 592 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 DNM1LO00429 736 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 OPLAHO14841 1288 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 NKRFO15226 690 aaKnown RBP eCLIP12.93□□□□□ -0.34
SF3B6-201ENST00000233468 DUSP11O75319 330 aaKnown RBP12.93□□□□□ -0.34
SF3B6-201ENST00000233468 NR3C2P08235 984 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 CCND2P30279 289 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 TNFAIP2Q03169 654 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 SCRN1Q12765 414 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 CCDC144BQ3MJ40 725 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 KCNV1Q6PIU1 500 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 RNF180Q86T96 592 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 GTF3C6Q969F1 213 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 PURBQ96QR8 312 aaKnown RBP12.93□□□□□ -0.34
SF3B6-201ENST00000233468 RIC8AQ9NPQ8 531 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 XPNPEP3Q9NQH7 507 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 STXBP5LQ9Y2K9 1186 aa12.93□□□□□ -0.34
SF3B6-201ENST00000233468 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms