RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 PPP2R3BQ9Y5P8 575 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 MYH6P13533 1939 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 STXBP3O00186 592 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SPINT1O43278 529 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 CTNND1O60716 968 aaKnown RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 BMP15O95972 392 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 ADH1AP07327 375 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SCTRP47872 440 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 NBPF12Q5TAG4 269 aaPredicted RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 LINC00301Q8NCQ3 95 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 GINM1Q9NU53 330 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 ZBTB5O15062 677 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 MARCKSP29966 332 aaPredicted RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 ECE1P42892 770 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 ADCY7P51828 1080 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 STAT2P52630 851 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 SLC39A14Q15043 492 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 CHURC1Q8WUH1 139 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 TEPSINQ96N21 525 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 WRNIP1Q96S55 665 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 NUP62CLQ9H1M0 184 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 CTDP1Q9Y5B0 961 aaPredicted RBP11.11□□□□□ -0.63
TTC1-201ENST00000231238 PCDHB11Q9Y5F2 797 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 TCHHQ07283 1943 aa11.11□□□□□ -0.63
TTC1-201ENST00000231238 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
TTC1-201ENST00000231238 SYCE3A1L190 88 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 NF2P35240 595 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 JAG1P78504 1218 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 TRAF1Q13077 416 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 PRKG1Q13976 671 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
TTC1-201ENST00000231238 EAPPQ56P03 285 aaPredicted RBP11.1□□□□□ -0.63
TTC1-201ENST00000231238 TTC38Q5R3I4 469 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
TTC1-201ENST00000231238 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
TTC1-201ENST00000231238 COA7Q96BR5 231 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 PGBD1Q96JS3 809 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 VCPKMTQ9H867 229 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 DACT1Q9NYF0 836 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 TMEM63CQ9P1W3 806 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 DNMT3LQ9UJW3 386 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 PCDHA7Q9UN72 937 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 MYH4Q9Y623 1939 aa11.1□□□□□ -0.63
TTC1-201ENST00000231238 A0A1W2PRG0 241 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 PPP6R2O75170 966 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 LIG1P18858 919 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 ZNF174Q15697 407 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 SLC35G1Q2M3R5 365 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 ADALQ6DHV7 355 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 SIAH1Q8IUQ4 282 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 DAGLBQ8NCG7 672 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 RASGRP4Q8TDF6 673 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 CUL5Q93034 780 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 TNMDQ9H2S6 317 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
TTC1-201ENST00000231238 DICER1Q9UPY3 1922 aaKnown RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
TTC1-201ENST00000231238 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
TTC1-201ENST00000231238 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
TTC1-201ENST00000231238 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
TTC1-201ENST00000231238 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
TTC1-201ENST00000231238 CUTAO60888 179 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms