RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 C6orf89Q6UWU4 347 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 PIK3AP1Q6ZUJ8 805 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 FBXO33Q7Z6M2 555 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 THOC1Q96FV9 657 aaKnown RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 ATP6V1G3Q96LB4 118 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 KRT12Q99456 494 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 TUBGCP2Q9BSJ2 902 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 LRRC4CQ9HCJ2 640 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 FAM207AQ9NSI2 230 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.58■□□□□ 0.08
SF1-201ENST00000227503 ATXN2Q99700 1313 aaKnown RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 DDB1Q16531 1140 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 FAM47AQ5JRC9 791 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 FNBP4Q8N3X1 1017 aaPredicted RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 CAVIN3Q969G5 261 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 SH2D4AQ9H788 454 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 DCP1AQ9NPI6 582 aaPredicted RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 BAIAP2L1Q9UHR4 511 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 ZNF652Q9Y2D9 606 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 DCDC2CA8MYV0 355 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 KLRK1P26718 216 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 MECOMQ03112 1051 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
SF1-201ENST00000227503 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 HPS3Q969F9 1004 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 TRIM6Q9C030 488 aaPredicted RBP15.57■□□□□ 0.08
SF1-201ENST00000227503 TTYH3Q9C0H2 523 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 ARHGAP20Q9P2F6 1191 aa15.57■□□□□ 0.08
SF1-201ENST00000227503 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 PHF20L1A8MW92 1017 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 PPP1R12AO14974 1030 aaPredicted RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 GTPBP6O43824 516 aaPredicted RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 NLRP5P59047 1200 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 ANKRD20A8PQ5CZ79 823 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 KLHL7Q8IXQ5 586 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 RASSF8Q8NHQ8 419 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 RNF217Q8TC41 542 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 LEMD3Q9Y2U8 911 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 HYOU1Q9Y4L1 999 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 FTCDO95954 541 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 CYP2D6P10635 497 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 EZRP15311 586 aaKnown RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 EIF4A3P38919 411 aaKnown RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 SCTRP47872 440 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 RASSF7Q02833 373 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 YTHDF3Q7Z739 585 aaKnown RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 C4orf32Q8N8J7 132 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 STAMBPL1Q96FJ0 436 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 EXOC1Q9NV70 894 aa15.56■□□□□ 0.08
SF1-201ENST00000227503 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
SF1-201ENST00000227503 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 UPP2O95045 317 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 PAFAH1B1P43034 410 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 HLTFQ14527 1009 aaKnown RBP eCLIP15.55■□□□□ 0.08
SF1-201ENST00000227503 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 CNOT8Q9UFF9 292 aaKnown RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 L3MBTL1Q9Y468 752 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 MTIF2P46199 727 aaKnown RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 KIF11P52732 1056 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 GFPT1Q06210 699 aaPredicted RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 BYSLQ13895 437 aaKnown RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 SPATS2Q86XZ4 545 aaKnown RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 CSGALNACT2Q8N6G5 542 aa15.55■□□□□ 0.08
SF1-201ENST00000227503 PYM1Q9BRP8 204 aaKnown RBP15.55■□□□□ 0.08
SF1-201ENST00000227503 H7C1D1 291 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 AKR1B10O60218 316 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 SRGNP10124 158 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 MYO1EQ12965 1108 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 ENOX2Q16206 610 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 EGFL6Q8IUX8 553 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 STAT6P42226 847 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 MRPL12P52815 198 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 ODF2Q5BJF6 829 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 IFT20Q8IY31 132 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 SEC16BQ96JE7 1060 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 CRNKL1Q9BZJ0 848 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 RTN2O75298 545 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 ZBED6P86452 979 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 SBK1Q52WX2 424 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 ARL6IP4Q66PJ3 421 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 HIBCHQ6NVY1 386 aaPredicted RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
SF1-201ENST00000227503 ATP8A2Q9NTI2 1148 aa15.54■□□□□ 0.08
SF1-201ENST00000227503 A0A1W2PQC6 194 aa15.53■□□□□ 0.08
SF1-201ENST00000227503 FAM170AA1A519 330 aa15.53■□□□□ 0.08
SF1-201ENST00000227503 GMNCA6NCL1 334 aa15.53■□□□□ 0.08
SF1-201ENST00000227503 USO1O60763 962 aaKnown RBP15.53■□□□□ 0.08
SF1-201ENST00000227503 ADAMTS2O95450 1211 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms