RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 MECOMQ03112 1051 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 ZNF662Q6ZS27 426 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 ADAMTS1Q9UHI8 967 aa13.95□□□□□ -0.18
PITRM1-201ENST00000224949 TSPY3P0CV98 308 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 TSPY8P0CW00 308 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 KLRC1P26715 233 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 KLRK1P26718 216 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 SKOR1P84550 965 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 PTGISQ16647 500 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 SLC9C1Q4G0N8 1177 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CNPY4Q8N129 248 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 MYCBPAPQ8TBZ2 947 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
PITRM1-201ENST00000224949 PACSIN1Q9BY11 444 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 RAD51CO43502 376 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CEP104O60308 925 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 ZNF34Q8IZ26 560 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 ATP6V1G3Q96LB4 118 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CTNNA1P35221 906 aaKnown RBP13.94□□□□□ -0.18
PITRM1-201ENST00000224949 MDH1P40925 334 aaKnown RBP13.94□□□□□ -0.18
PITRM1-201ENST00000224949 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
PITRM1-201ENST00000224949 E2F5Q15329 346 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 SFMBT2Q5VUG0 894 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 SIK3Q9Y2K2 1263 aa13.94□□□□□ -0.18
PITRM1-201ENST00000224949 ECM2O94769 699 aaPredicted RBP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 POTEMA6NI47 508 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 GCOM1H8Y6P7 765 aaPredicted RBP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 NONOQ15233 471 aaKnown RBP eCLIP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 KDM7AQ6ZMT4 941 aa13.93□□□□□ -0.18
PITRM1-201ENST00000224949 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
PITRM1-201ENST00000224949 FRMD3A2A2Y4 597 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 MYMKA6NI61 221 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 EPB41P11171 864 aaKnown RBP13.92□□□□□ -0.18
PITRM1-201ENST00000224949 SWT1Q5T5J6 900 aaKnown RBP13.92□□□□□ -0.18
PITRM1-201ENST00000224949 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 CCDC13Q8IYE1 715 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 TSG101Q99816 390 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 LUC7LQ9NQ29 371 aaKnown RBP13.92□□□□□ -0.18
PITRM1-201ENST00000224949 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.92□□□□□ -0.18
PITRM1-201ENST00000224949 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 MYL1P05976 194 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
PITRM1-201ENST00000224949 TBCKQ8TEA7 893 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 GJA10Q969M2 543 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 KLC4Q9NSK0 619 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 CYTH3O43739 400 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 PRLRP16471 622 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 TNNC1P63316 161 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 KLHL30Q0D2K2 578 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
PITRM1-201ENST00000224949 FGFR1OPO95684 399 aaKnown RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 CDK17Q00537 523 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 ZSCAN29Q8IWY8 852 aaPredicted RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 A6NNZ2 444 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 FIGNQ5HY92 759 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 FLT1P17948 1338 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 TNS2Q63HR2 1409 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 ITIH3Q06033 890 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 NEK8Q86SG6 692 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 LARP4BQ92615 738 aaKnown RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 NSUN4Q96CB9 384 aaKnown RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 CYFIP2Q96F07 1278 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 FAM84BQ96KN1 310 aaPredicted RBP13.91□□□□□ -0.18
PITRM1-201ENST00000224949 C7orf25Q9BPX7 421 aa13.91□□□□□ -0.18
PITRM1-201ENST00000224949 GOPCQ9HD26 462 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms