RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
LSM5-201ENST00000223084 SCRN1Q12765 414 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 VSIG10LQ86VR7 867 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 C7orf61Q8IZ16 206 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 SCFD2Q8WU76 684 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 KIF2CQ99661 725 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 C22orf23Q9BZE7 217 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 SLKQ9H2G2 1235 aaPredicted RBP14.58□□□□□ -0.08
LSM5-201ENST00000223084 A0A1W2PQ45 241 aaPredicted RBP14.57□□□□□ -0.08
LSM5-201ENST00000223084 A0A1W2PQY0 241 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 SMCO2A6NFE2 343 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 H0YGN5 161 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 CPLX1O14810 134 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 ADAMTS3O15072 1205 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 LARGE1O95461 756 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 ASGR1P07306 291 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
LSM5-201ENST00000223084 CCND2P30279 289 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 ADCY7P51828 1080 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
LSM5-201ENST00000223084 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 SLC39A5Q6ZMH5 540 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 PGBD1Q96JS3 809 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 TSEN34Q9BSV6 310 aaKnown RBP14.57□□□□□ -0.08
LSM5-201ENST00000223084 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
LSM5-201ENST00000223084 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 RTEL1Q9NZ71 1219 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 Q9Y3F1 56 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 FRMPD4Q14CM0 1322 aa14.57□□□□□ -0.08
LSM5-201ENST00000223084 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 SORBS3O60504 671 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 PFKFB2O60825 505 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 RTP1P59025 263 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 NKX3-2P78367 333 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 MRPS9P82933 396 aaKnown RBP14.56□□□□□ -0.08
LSM5-201ENST00000223084 SSRP1Q08945 709 aaKnown RBP14.56□□□□□ -0.08
LSM5-201ENST00000223084 ANKRD1Q15327 319 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
LSM5-201ENST00000223084 NECAB1Q8N987 351 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
LSM5-201ENST00000223084 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 MYH7BA7E2Y1 1941 aa14.56□□□□□ -0.08
LSM5-201ENST00000223084 MOXD2PA6NHM9 499 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
LSM5-201ENST00000223084 ME3Q16798 604 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 TRIM60Q495X7 471 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 CXCL17Q6UXB2 119 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 VTI1AQ96AJ9 217 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 AIFM3Q96NN9 605 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 STARD7Q9NQZ5 370 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 VPS54Q9P1Q0 977 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 RBM27Q9P2N5 1060 aaKnown RBP14.55□□□□□ -0.08
LSM5-201ENST00000223084 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
LSM5-201ENST00000223084 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
LSM5-201ENST00000223084 ATP11BQ9Y2G3 1177 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
LSM5-201ENST00000223084 SPDYE3A6NKU9 549 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 CTDNEP1O95476 244 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 SYN1P17600 705 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
LSM5-201ENST00000223084 JAKMIP3Q5VZ66 844 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 PCNX4Q63HM2 1172 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 CPLX2Q6PUV4 134 aaKnown RBP14.54□□□□□ -0.08
LSM5-201ENST00000223084 TRIM22Q8IYM9 498 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 NR2E3Q9Y5X4 410 aa14.54□□□□□ -0.08
LSM5-201ENST00000223084 ZEB2O60315 1214 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 GH1P01241 217 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 MYL3P08590 195 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
LSM5-201ENST00000223084 PSMC6P62333 389 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 SP2Q02086 613 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 ARHGAP1Q07960 439 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 SEMA3FQ13275 785 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 SNX17Q15036 470 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 GLT1D1Q96MS3 346 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 ANO3Q9BYT9 981 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 ZMYND12Q9H0C1 365 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 BCAS3Q9H6U6 928 aa14.53□□□□□ -0.08
LSM5-201ENST00000223084 ESYT2A0FGR8 921 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 DEXIO95424 95 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 UBA1P22314 1058 aaKnown RBP14.52□□□□□ -0.09
LSM5-201ENST00000223084 TLE2Q04725 743 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 ST3GAL1Q11201 340 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 RASGRP4Q8TDF6 673 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 CCDC12Q8WUD4 166 aaPredicted RBP14.52□□□□□ -0.09
LSM5-201ENST00000223084 GTF3C6Q969F1 213 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 INPP4AQ96PE3 977 aaPredicted RBP14.52□□□□□ -0.09
LSM5-201ENST00000223084 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 DOCK5Q9H7D0 1870 aa14.52□□□□□ -0.09
LSM5-201ENST00000223084 ELP1O95163 1332 aa14.51□□□□□ -0.09
LSM5-201ENST00000223084 A6NJR5 290 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms