RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 GH1P01241 217 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 DEFB128Q7Z7B8 93 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 MAFAQ8NHW3 353 aaPredicted RBP25.7■■□□□ 1.7
VTI1B-201ENST00000216456 KAT2BQ92831 832 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 PDCD2LQ9BRP1 358 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 ZNF576Q9H609 170 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 LY9Q9HBG7 655 aa25.7■■□□□ 1.7
VTI1B-201ENST00000216456 FOSL2P15408 326 aa25.69■■□□□ 1.7
VTI1B-201ENST00000216456 GHRHRQ02643 423 aa25.69■■□□□ 1.7
VTI1B-201ENST00000216456 BRDTQ58F21 947 aaPredicted RBP25.69■■□□□ 1.7
VTI1B-201ENST00000216456 FCHSD1Q86WN1 690 aa25.69■■□□□ 1.7
VTI1B-201ENST00000216456 RAB11FIP4Q86YS3 637 aa25.69■■□□□ 1.7
VTI1B-201ENST00000216456 SEZ6LQ9BYH1 1024 aa25.69■■□□□ 1.7
VTI1B-201ENST00000216456 EIF3JO75822 258 aaKnown RBP25.68■■□□□ 1.7
VTI1B-201ENST00000216456 RXRAP19793 462 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 RABGGTBP53611 331 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 CTAGE1Q96RT6 745 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 ESYT1Q9BSJ8 1104 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 BCAS3Q9H6U6 928 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 YBX2Q9Y2T7 364 aaKnown RBP25.68■■□□□ 1.7
VTI1B-201ENST00000216456 MRVI1Q9Y6F6 885 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 SCN5AQ14524 2016 aa25.68■■□□□ 1.7
VTI1B-201ENST00000216456 KIAA1217Q5T5P2 1943 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 MYOGP15173 224 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 SP2Q02086 613 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 PGM5Q15124 567 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 NFRKBQ6P4R8 1299 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 CATIPQ7Z7H3 387 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.67■■□□□ 1.7
VTI1B-201ENST00000216456 CMTR1Q8N1G2 835 aaKnown RBP25.67■■□□□ 1.7
VTI1B-201ENST00000216456 LRRC2Q9BYS8 371 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 MAF1Q9H063 256 aa25.67■■□□□ 1.7
VTI1B-201ENST00000216456 SLC27A2O14975 620 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 PRC1O43663 620 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 KPNA6O60684 536 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 SUPT20HL2P0C7V6 817 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 ZNF286BP0CG31 522 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 SART3Q15020 963 aaKnown RBP25.66■■□□□ 1.7
VTI1B-201ENST00000216456 GDF6Q6KF10 455 aaPredicted RBP25.66■■□□□ 1.7
VTI1B-201ENST00000216456 ZNF654Q8IZM8 581 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 NKX2-4Q9H2Z4 354 aa25.66■■□□□ 1.7
VTI1B-201ENST00000216456 TMEM265A0A087WTH1 108 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 PNMA6FA0A0J9YX94 578 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 ZBBXA8MT70 800 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 PLEKHA8P1O95397 391 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 VSIG10LQ86VR7 867 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 USP38Q8NB14 1042 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 ALG1Q9BT22 464 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 CHD7Q9P2D1 2997 aa25.65■■□□□ 1.7
VTI1B-201ENST00000216456 GCOM1H8Y6P7 765 aaPredicted RBP25.64■■□□□ 1.7
VTI1B-201ENST00000216456 POLR2MP0CAP2 368 aa25.64■■□□□ 1.7
VTI1B-201ENST00000216456 PTGISQ16647 500 aa25.64■■□□□ 1.7
VTI1B-201ENST00000216456 PRDM12Q9H4Q4 367 aa25.64■■□□□ 1.7
VTI1B-201ENST00000216456 VCANP13611 3396 aa25.64■■□□□ 1.7
VTI1B-201ENST00000216456 SH2B2O14492 632 aaPredicted RBP25.63■■□□□ 1.69
VTI1B-201ENST00000216456 CREB3L3Q68CJ9 461 aa25.63■■□□□ 1.69
VTI1B-201ENST00000216456 DHX37Q8IY37 1157 aaKnown RBP25.63■■□□□ 1.69
VTI1B-201ENST00000216456 DHX38Q92620 1227 aaKnown RBP25.63■■□□□ 1.69
VTI1B-201ENST00000216456 HDAC6Q9UBN7 1215 aa25.63■■□□□ 1.69
VTI1B-201ENST00000216456 GBF1Q92538 1859 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 hCG_1642624A0A1W2PR95 340 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 IQCF3P0C7M6 154 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 CASTP20810 708 aaKnown RBP25.62■■□□□ 1.69
VTI1B-201ENST00000216456 ZNF200P98182 395 aaPredicted RBP25.62■■□□□ 1.69
VTI1B-201ENST00000216456 HIC1Q14526 733 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 HSDL1Q3SXM5 330 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 RPUSD2Q8IZ73 545 aaKnown RBP25.62■■□□□ 1.69
VTI1B-201ENST00000216456 SRBD1Q8N5C6 995 aaKnown RBP25.62■■□□□ 1.69
VTI1B-201ENST00000216456 ANO2Q9NQ90 1003 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 NOD1Q9Y239 953 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 TELO2Q9Y4R8 837 aa25.62■■□□□ 1.69
VTI1B-201ENST00000216456 GGPS1O95749 300 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 UBA1P22314 1058 aaKnown RBP25.61■■□□□ 1.69
VTI1B-201ENST00000216456 PSEN2P49810 448 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 MRPS9P82933 396 aaKnown RBP25.61■■□□□ 1.69
VTI1B-201ENST00000216456 PTPN11Q06124 597 aaPredicted RBP25.61■■□□□ 1.69
VTI1B-201ENST00000216456 GPNMBQ14956 572 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 NECTIN1Q15223 517 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 DGKDQ16760 1214 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 MYSM1Q5VVJ2 828 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 USP17L6PQ6QN14 398 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 CASC1Q6TDU7 716 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 WNT8BQ93098 351 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 EMID1Q96A84 441 aaPredicted RBP25.61■■□□□ 1.69
VTI1B-201ENST00000216456 SLC4A7Q9Y6M7 1214 aa25.61■■□□□ 1.69
VTI1B-201ENST00000216456 LAMC2Q13753 1193 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 ADGRE1Q14246 886 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 CELF3Q5SZQ8 465 aaKnown RBP25.6■■□□□ 1.69
VTI1B-201ENST00000216456 NFXL1Q6ZNB6 911 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 PPTC7Q8NI37 304 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 SPATA33Q96N06 139 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 COL25A1Q9BXS0 654 aaPredicted RBP25.6■■□□□ 1.69
VTI1B-201ENST00000216456 PRDM6Q9NQX0 595 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 MAP3K20Q9NYL2 800 aaKnown RBP25.6■■□□□ 1.69
VTI1B-201ENST00000216456 RTEL1Q9NZ71 1219 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 MSRAQ9UJ68 235 aa25.6■■□□□ 1.69
VTI1B-201ENST00000216456 DDAH1O94760 285 aa25.59■■□□□ 1.69
VTI1B-201ENST00000216456 CCND2P30279 289 aa25.59■■□□□ 1.69
VTI1B-201ENST00000216456 MCM5P33992 734 aa25.59■■□□□ 1.69
VTI1B-201ENST00000216456 MFSD10Q14728 455 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms