RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SCLT1Q96NL6 688 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 FAM53CQ9NYF3 392 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 PSEN1P49768 467 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 STK4Q13043 487 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 CTTNQ14247 550 aaKnown RBP14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 NCAPHQ15003 741 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 BRD3Q15059 726 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 POTEGQ6S5H5 508 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
PCDHB4-201ENST00000194152 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 A0A0U1RQJ8 604 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 STXBP3O00186 592 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 SLC37A4O43826 429 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 TUBB4AP04350 444 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CORO7P57737 925 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 PRPF4BQ13523 1007 aaKnown RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 NAA25Q14CX7 972 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 GSDMAQ96QA5 445 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 TUBGCP2Q9BSJ2 902 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 GCNT3O95395 438 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 SCP2P22307 547 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 ACER1Q8TDN7 264 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 SCN11AQ9UI33 1791 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CHRM1P11229 460 aaPredicted RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 CALRP27797 417 aaKnown RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 LONP1P36776 959 aaKnown RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 OSBPL5Q9H0X9 879 aaPredicted RBP14.28□□□□□ -0.12
PCDHB4-201ENST00000194152 IKBKBO14920 756 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 PEX19P40855 299 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 PAFAH1B1P43034 410 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 SF3A3Q12874 501 aaKnown RBP eCLIP14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 BIRC2Q13490 618 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 ENOX1Q8TC92 643 aaKnown RBP14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 PLCD4Q9BRC7 762 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 LUC7LQ9NQ29 371 aaKnown RBP14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 TRIM10Q9UDY6 481 aa14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.27□□□□□ -0.12
PCDHB4-201ENST00000194152 PPFIA4O75335 1185 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 CXCR5P32302 372 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 N4BP2L2Q92802 583 aaPredicted RBP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 RGL1Q9NZL6 768 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 TAF1P21675 1872 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 TESPA1A2RU30 521 aaPredicted RBP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 BUB1O43683 1085 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 FAM13AO94988 1023 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 PCP11498 1178 aaKnown RBP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 ADRA2BP18089 450 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 CYP2J2P51589 502 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 GRM1Q13255 1194 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 PROM2Q8N271 834 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 MYCT1Q8N699 235 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 TBC1D5Q92609 795 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 TAF4BQ92750 862 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 CHP1Q99653 195 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 ANAPC4Q9UJX5 808 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
PCDHB4-201ENST00000194152 NDUFAB1O14561 156 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 DGKZQ13574 1117 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 KIRREL3Q8IZU9 778 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 MRPL44Q9H9J2 332 aaKnown RBP14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 FAM169AQ9Y6X4 670 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 SPATA31A6Q5VVP1 1343 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 FLOT1O75955 427 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 BMP3P12645 472 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 DPYDQ12882 1025 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 SBK1Q52WX2 424 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 EEPD1Q7L9B9 569 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 CDAN1Q8IWY9 1227 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 CEP112Q8N8E3 955 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 FAM76AQ8TAV0 307 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 DDX12PQ92771 950 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 COL1A1P02452 1464 aaPredicted RBP14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 KRT86O43790 486 aa14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 SARNPP82979 210 aaKnown RBP14.26□□□□□ -0.13
PCDHB4-201ENST00000194152 FAM114A1Q8IWE2 563 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms