RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 CEP85LQ5SZL2 805 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
UBR7-201ENST00000013070 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
UBR7-201ENST00000013070 ZIM3Q96PE6 472 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 EYA3Q99504 573 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 BSDC1Q9NW68 430 aaPredicted RBP14.27□□□□□ -0.13
UBR7-201ENST00000013070 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 FAM153AQ9UHL3 310 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 PHRF1Q9P1Y6 1649 aaKnown RBP14.27□□□□□ -0.13
UBR7-201ENST00000013070 STXBP3O00186 592 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 KCNK3O14649 394 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 ADAT2Q7Z6V5 191 aaKnown RBP14.27□□□□□ -0.13
UBR7-201ENST00000013070 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
UBR7-201ENST00000013070 GLI1P08151 1106 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 EPHB4P54760 987 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 MEA1Q16626 185 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 DDX12PQ92771 950 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 SPAG5Q96R06 1193 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 MPHOSPH10O00566 681 aaKnown RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 CEP104O60308 925 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 BAG3O95817 575 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 OR2W6PQ8NHA6 318 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 SEPT11Q9NVA2 429 aaKnown RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 PLAGL2Q9UPG8 496 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 TNS2Q63HR2 1409 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 AARSP49588 968 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBR7-201ENST00000013070 KLHL30Q0D2K2 578 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 MAN2A1Q16706 1144 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 HERC4Q5GLZ8 1057 aaPredicted RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 DCAF17Q5H9S7 520 aaPredicted RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 NAA35Q5VZE5 725 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 IFT20Q8IY31 132 aa14.26□□□□□ -0.13
UBR7-201ENST00000013070 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
UBR7-201ENST00000013070 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 E7EVH7 732 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 GRIK5Q16478 980 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 SLC35G1Q2M3R5 365 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 SFMBT2Q5VUG0 894 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 ZNF804BA4D1E1 1349 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 A0A087WUV0 522 aaPredicted RBP14.25□□□□□ -0.13
UBR7-201ENST00000013070 HAUS3Q68CZ6 603 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
UBR7-201ENST00000013070 DGKHQ86XP1 1220 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 DDX42Q86XP3 938 aaKnown RBP eCLIP14.25□□□□□ -0.13
UBR7-201ENST00000013070 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 NID2Q14112 1375 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
UBR7-201ENST00000013070 USP17L5A8MUK1 530 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
UBR7-201ENST00000013070 SLC16A2P36021 539 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 IRX3P78415 501 aaPredicted RBP14.25□□□□□ -0.13
UBR7-201ENST00000013070 TBC1D9BQ66K14 1250 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 TEX11Q8IYF3 940 aa14.25□□□□□ -0.13
UBR7-201ENST00000013070 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.25□□□□□ -0.13
UBR7-201ENST00000013070 MYH10P35580 1976 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 GOLGA8KD6RF30 607 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 PCP11498 1178 aaKnown RBP14.24□□□□□ -0.13
UBR7-201ENST00000013070 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 AENQ8WTP8 325 aaKnown RBP14.24□□□□□ -0.13
UBR7-201ENST00000013070 UBLCP1Q8WVY7 318 aaPredicted RBP14.24□□□□□ -0.13
UBR7-201ENST00000013070 TTYH3Q9C0H2 523 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 EFCC1Q9HA90 598 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 LUC7LQ9NQ29 371 aaKnown RBP14.24□□□□□ -0.13
UBR7-201ENST00000013070 EIF3HO15372 352 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBR7-201ENST00000013070 KLRC1P26715 233 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 SETQ01105 290 aaPredicted RBP14.24□□□□□ -0.13
UBR7-201ENST00000013070 IFT88Q13099 833 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 GRM4Q14833 912 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 TTMPQ5BVD1 217 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 ADAMTS7Q9UKP4 1686 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 MYH7P12883 1935 aa14.24□□□□□ -0.13
UBR7-201ENST00000013070 SLC37A4O43826 429 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 TLR10Q9BXR5 811 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 RAB34Q9BZG1 259 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 TRPM3Q9HCF6 1732 aaPredicted RBP14.23□□□□□ -0.13
UBR7-201ENST00000013070 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
UBR7-201ENST00000013070 KCNK18Q7Z418 384 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 ERGIC2Q96RQ1 377 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 BCL9O00512 1426 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 MYO1FO00160 1098 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
UBR7-201ENST00000013070 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
UBR7-201ENST00000013070 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
UBR7-201ENST00000013070 ACTN1P12814 892 aa14.22□□□□□ -0.13
UBR7-201ENST00000013070 PAK2Q13177 524 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms