RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Traf5P70191 558 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nr1d1Q3UV55 615 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fbxo9Q8BK06 437 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rwdd2aQ9D9S3 292 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 MesdQ9ERE7 224 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Angptl3Q9R182 455 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt24A1L317 512 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cyp3a25O09158 503 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Akr1b8P45377 316 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sec63Q8VHE0 760 aaKnown RBP10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 HibadhQ99L13 335 aaKnown RBP10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 MycbpQ9EQS3 103 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Dip2cE9PWR4 1557 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 XlrP05531 208 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cfap52Q5F201 620 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nlrp9bQ66X22 1003 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Terb1Q8C0V1 768 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Stoml1Q8CI66 399 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Lmbrd1Q8K0B2 537 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gbp6A0A0G2JDV3 611 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cyp2c23E9Q5K4 494 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pagr1bF6V0H0 108 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm43302L7N1X8 611 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cdk4P30285 303 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ogfod1Q3U0K8 545 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 LbrQ3U9G9 626 aaKnown RBP10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kctd1Q5M956 257 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Slc7a6osQ7TPE5 306 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Hpcal4Q8BGZ1 191 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Apopt1Q9CQW7 192 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fyb2A2A995 729 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ap1m1P35585 423 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ccdc160Q3UYG1 323 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Meis1Q60954 390 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt87Q6IMF0 495 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Acap2Q6ZQK5 770 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ttll4Q80UG8 1193 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Prpf3Q922U1 683 aaKnown RBP10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Trim59Q922Y2 403 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Flt4P35917 1363 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ercc6l2Q9JIM3 1537 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Eps15P42567 897 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pabpc4Q6PHQ9 660 aaKnown RBP10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 BaatQ91X34 420 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gipc1Q9Z0G0 333 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nlrp1bA1Z198 1177 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tcp10bE9PYJ0 438 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 IvlP48997 467 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Retreg2Q6NS82 541 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 F13a1Q8BH61 732 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ano4Q8C5H1 955 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 C130026I21RikQ8C898 291 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ces1dQ8VCT4 565 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Adarb2Q9JI20 745 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tmod4Q9JLH8 345 aa10.02□□□□□ -0.8
Scn8a-213ENSMUST00000201549 ZwilchQ8R060 589 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Rrp1bQ91YK2 724 aaKnown RBP10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 PtprmP28828 1452 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Cyp3a59D3Z2W7 503 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Atp6v1e1P50518 226 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Exosc10P56960 887 aaKnown RBP10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Lca5Q80ST9 704 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Rcor2Q8C796 523 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Dhx58Q99J87 678 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tpcn1Q9EQJ0 817 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tmem191cQ9JJB1 302 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Nedd9O35177 833 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Pla2g4bP0C871 782 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tdo2P48776 406 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Atp8a1P70704 1164 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Atp1b3P97370 278 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Cyp4x1Q6A152 507 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Usp50Q6P8X6 390 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Dr1Q91WV0 176 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Orc1Q9Z1N2 840 aaKnown RBP10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 CemipQ8BI06 1361 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Carmil3Q3UFQ8 1375 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Sclt1G5E861 688 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gad1P48318 593 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ccdc92bQ5SUE3 299 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Dclk2Q6PGN3 756 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Rbm41Q8JZV4 413 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Cd2bp2Q9CWK3 342 aaKnown RBP10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Trmt112Q9DCG9 125 aa10.02□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ttc37F8VPK0 1563 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Qtrt2B8ZXI1 415 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Llgl2Q3TJ91 1027 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Krt12Q64291 487 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Szrd1Q6NXN1 152 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Hdac4Q6NZM9 1076 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Kctd10Q922M3 315 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tlcd1Q99JT6 247 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ccdc124Q9D8X2 217 aaKnown RBP10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Nr2f2P43135 414 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Pde1bQ01065 535 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Fam178bQ24JP3 464 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Csgalnact2Q8C1F4 542 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Erp44Q9D1Q6 406 aa10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Habp4Q9JKS5 411 aaKnown RBP10.01□□□□□ -0.81
Scn8a-213ENSMUST00000201549 CebpaP53566 359 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms