RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Ushbp1Q8R370 680 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Trpc3Q9QZC1 836 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tmed2Q9R0Q3 201 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nlrp5Q9R1M5 1163 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Plxnc1Q9QZC2 1574 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Sclt1G5E861 688 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Acot6Q32Q92 419 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 GartQ64737 1010 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nlrp4fQ66X05 959 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 CtifQ6PEE2 600 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Rbm15bQ6PHZ5 887 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 PolrmtQ8BKF1 1207 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Spice1Q8C804 860 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ccdc87Q8CDL9 855 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Q8R1Y2 203 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 GzmnQ920S1 248 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gimap4Q99JY3 219 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Golph3Q9CRA5 298 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pramef12Q9D2F1 463 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Trpm2Q91YD4 1506 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 PltpP55065 493 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 FerP70451 823 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ano9P86044 747 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 ErmnQ5EBJ4 281 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Kctd1Q5M956 257 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Aggf1Q7TN31 711 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 GancQ8BVW0 898 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Terb1Q8C0V1 768 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Fam161bQ8CB59 589 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Appl2Q8K3G9 662 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pacsin2Q9WVE8 486 aaKnown RBP12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mroh6V9GX81 722 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Abcc3B2RX12 1523 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 VdrP48281 422 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sec23ipQ6NZC7 998 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sptlc3Q8BG54 563 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ddx19bQ8BZY3 494 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pcdhb2Q91Y00 799 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Creld2Q9CYA0 350 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cst12Q9DAN8 128 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pck1Q9Z2V4 622 aa12.71□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Taf4E9QAP7 1042 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Traf1P39428 409 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dynlt1P51807 113 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Snap25P60879 206 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pald1P70261 859 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Znf827Q505G8 1078 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Haus4Q8BFT2 363 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Clca2Q8BG22 942 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Eif3cQ8R1B4 911 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Lrrc8cQ8R502 803 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Grin3bQ91ZU9 1003 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dnajc14Q921R4 703 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Kif1bQ60575 1816 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tpp1O89023 562 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 AdalQ80SY6 360 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gbp9Q8BTS3 619 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 NemfQ8CCP0 1064 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mylk2Q8VCR8 613 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ddx39aQ8VDW0 427 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cd2bp2Q9CWK3 342 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Erp44Q9D1Q6 406 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Trmt44Q9D2Q2 713 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Snrnp35Q9D384 244 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Eef1gQ9D8N0 437 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 IdeQ9JHR7 1019 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mtmr2Q9Z2D1 643 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Slc8a1P70414 970 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Kiaa1468Q148V7 1216 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pstpip2Q99M15 334 aa12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Hyou1Q9JKR6 999 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rrbp1Q99PL5 1605 aaKnown RBP12.7□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Nme9A0A1L1SUL6 329 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm10134F6ZQC6 126 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tnni3P48787 211 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 PcQ05920 1178 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Slc44a1Q6X893 653 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ripor2Q80U16 1078 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Susd4Q8BH32 490 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Prpf6Q91YR7 941 aaKnown RBP12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ranbp17Q99NF8 1088 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rgs12Q8CGE9 1381 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc175E9PVB3 822 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Nr5a1P33242 462 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ddx3yQ62095 658 aaKnown RBP12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cnnm4Q69ZF7 771 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Retreg2Q6NS82 541 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ubxn10Q8BG34 277 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 EpgnQ924X1 152 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sdr42e1Q9D665 394 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Maged2Q9ER67 616 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Peg12Q9WVA7 283 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Adcy9P51830 1353 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ess2O70279 479 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gap43P06837 227 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 RaraP11416 462 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Lmnb2P21619 596 aaKnown RBP12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 GabrdP22933 449 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Zscan2Q07230 614 aa12.69□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tfcp2l1Q3UNW5 479 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms