RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 CrygnQ8VHL5 183 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Pcdha7Q91Y13 937 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ddah1Q9CWS0 285 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 SelenooQ9DBC0 667 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Ccdc88cQ6VGS5 2009 aa28.76■■■□□ 2.2
Tpm1-216ENSMUST00000113707 Scgb2b18A0A087WPA9 112 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Slc2a13Q3UHK1 637 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Islr2Q5RKR3 745 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Ankrd40Q5SUE8 363 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Tmem63cQ8CBX0 802 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Kcnv2Q8CFS6 562 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Ces4aQ8R0W5 563 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Glis2Q8VDL9 521 aa28.76■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Gm5934D3Z4U6 212 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Sox5P35710 763 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 BcrQ6PAJ1 1270 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 CnstQ8CBC4 711 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Rab3il1Q8VDV3 383 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Coa7Q921H9 231 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Serpinb12Q9D7P9 423 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Sapcd2Q9D818 391 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Extl2Q9ES89 330 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Chaf1aQ9QWF0 911 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Fem1bQ9Z2G0 627 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Ttc6G3UYY4 1857 aa28.75■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Appl2Q8K3G9 662 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Psmd2Q8VDM4 908 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Mtmr6Q8VE11 617 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Aldh1b1Q9CZS1 519 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Gm7168A0AUV4 508 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Map4k1P70218 827 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Bri3bpQ8BXV2 253 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 AacsQ9D2R0 672 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Copb1Q9JIF7 953 aa28.74■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Gm3095E9Q058 166 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Magea1O89006 320 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Magea5O89009 320 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Pbx1P41778 430 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Foxd1Q61345 456 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 DaglbQ91WC9 669 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Il21rQ9JHX3 529 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Ddx20Q9JJY4 825 aaKnown RBP28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Magea2Q9R2A2 320 aa28.73■■■□□ 2.19
Tpm1-216ENSMUST00000113707 MtrA6H5Y3 1253 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 NcapgE9PWG6 1004 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Barx2O08686 283 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Myo1aO88329 1043 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Parp2O88554 559 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Ccdc105Q9D4K7 499 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 SerhlQ9EPB5 311 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Man1a2P39098 641 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 NfibP97863 570 aaKnown RBP28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Kcnd1Q03719 651 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Q3UJP5 209 aa28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Nop9Q8BMC4 636 aaKnown RBP28.72■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Znf568E9PYI1 671 aa28.71■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Cdkn1cP49919 348 aa28.71■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Grik5Q61626 979 aa28.71■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Rexo1Q7TT28 1213 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Slc17a8Q8BFU8 601 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Stard7Q8R1R3 373 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Tc2nQ91XT6 489 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Tgs1Q923W1 853 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Gnl2Q99LH1 728 aaKnown RBP28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Haus2Q9CQS9 234 aa28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 SetQ9EQU5 289 aaKnown RBP28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Map3k20Q9ESL4 802 aaKnown RBP28.7■■■□□ 2.19
Tpm1-216ENSMUST00000113707 Mmp10O55123 476 aa28.7■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Abcb4P21440 1276 aa28.7■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Nsun7Q14AW5 724 aa28.7■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Meis1Q60954 390 aa28.7■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Pgrmc2Q80UU9 217 aaKnown RBP28.7■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Apol10bG3X9K7 334 aa28.69■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Pstpip1P97814 415 aa28.69■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Brd3Q8K2F0 726 aaKnown RBP28.69■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Sbf2E9PXF8 1872 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Diaph1O08808 1255 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Ric8aQ3TIR3 530 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Ppp2r5cQ60996 524 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Jade2Q6ZQF7 829 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Tmc3Q7TQ69 1130 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Dnm3Q8BZ98 863 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Dennd2aQ8C4S8 1000 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 PccaQ91ZA3 724 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Polr2aP08775 1970 aaKnown RBP28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Rexo5D3YW29 759 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Ptgs1P22437 602 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Gtpbp6Q3U6U5 514 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 DnerQ8JZM4 737 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Vta1Q9CR26 309 aa28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Tmx2Q9D710 295 aaKnown RBP28.68■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Mms22lB1AUR6 1238 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Jakmip2D3YXK0 820 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Gas7Q60780 421 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Rgl2Q61193 778 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Panx2Q6IMP4 677 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Senp7Q8BUH8 1037 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Ano2Q8CFW1 1002 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 Josd2Q9CR30 188 aa28.67■■■□□ 2.18
Tpm1-216ENSMUST00000113707 AmfrQ9R049 643 aa28.67■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms