RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Slc4a9E9PUP3 929 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gm4307E9PZY4 289 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gm4312K9J7E2 289 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmem35bQ3U0Y2 150 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Sema4bQ62179 823 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gpbp1Q6NXH3 473 aaKnown RBP20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Papd7Q6PB75 542 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ttc26Q8BS45 554 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmx4Q8C0L0 335 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Vmn1r218Q8R261 298 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Mis18aQ9CZJ6 204 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Aldh1b1Q9CZS1 519 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Akap8Q9DBR0 687 aaKnown RBP20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Zscan18E9PUD6 809 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Parp1P11103 1013 aaKnown RBP20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Aco1P28271 889 aaKnown RBP20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ptpn12P35831 775 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Akap4Q60662 849 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Kdm1aQ6ZQ88 853 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Zdhhc14Q8BQQ1 489 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Apbb1ipQ8R5A3 670 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Sar1bQ9CQC9 198 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Eif2ak3Q9Z2B5 1114 aa20.32■□□□□ 0.84
Trim47-202ENSMUST00000106441 Pcdh15Q99PJ1 1943 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Snx12O70493 165 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Lrrc4bP0C192 709 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Mybl2P48972 704 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Qrich1Q3UA37 777 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ift74Q8BKE9 600 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Hs2st1Q8R3H7 356 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Dbndd2Q9CRD4 158 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 GrapQ9CX99 217 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Myh14Q6URW6 2000 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Klra4Q60651 263 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ddx3yQ62095 658 aaKnown RBP20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Phf20Q8BLG0 1010 aaKnown RBP20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 OplahQ8K010 1288 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Exoc1Q8R3S6 894 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmem39aQ9CYC3 486 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Cd2apQ9JLQ0 637 aa20.31■□□□□ 0.84
Trim47-202ENSMUST00000106441 Sec14l1A8Y5H7 715 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 SarsP26638 512 aaKnown RBP20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Bace1P56818 501 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 D630036H23RikQ3UQD6 204 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Stxbp2Q64324 593 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmem130Q6NXM3 419 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Dnph1Q80VJ3 173 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Phc3Q8CHP6 981 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ribc1Q9D0B8 379 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Syf2Q9D198 242 aaKnown RBP20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Fsip1Q9D3V5 435 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Pkd2l2Q9JLG4 621 aa20.3■□□□□ 0.84
Trim47-202ENSMUST00000106441 Bpifb4A2BGH0 617 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gm28042B7ZCM9 1014 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Pth1rP41593 591 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 CtshP49935 333 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Sema3eP70275 775 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Brip1Q5SXJ3 1174 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Usp50Q6P8X6 390 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Eif3cQ8R1B4 911 aaKnown RBP20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Snapc2Q91XA5 359 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 L1camP11627 1260 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Abhd15Q5F2F2 459 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Myo19Q5SV80 963 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Epc2Q8C0I4 808 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Spice1Q8C804 860 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 C8aQ8K182 587 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Rab3il1Q8VDV3 383 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Pex3Q9QXY9 372 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Nr2e3Q9QXZ7 395 aa20.29■□□□□ 0.84
Trim47-202ENSMUST00000106441 Rgs22G3UYX5 1258 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ranbp1P34022 203 aaKnown RBP20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 PpardP35396 440 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tll1Q62381 1013 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Irak1Q62406 710 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Krt74Q6IFZ9 495 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Pip5kl1Q6U7H8 395 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Cfap100Q80VN0 613 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 D130040H23RikQ8BII3 405 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Cdk17Q8K0D0 523 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Lzts2Q91YU6 671 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 MymkQ9D1N4 221 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 XdhQ00519 1335 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ppef2O35385 757 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Stag2O35638 1231 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Evi5P97366 809 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmtc1Q3UV71 942 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Slc9a2Q3ZAS0 814 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tmem232Q5K6N0 675 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gpt2Q8BGT5 522 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Gpsm2Q8VDU0 679 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Mad2l2Q9D752 211 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Tpcn1Q9EQJ0 817 aa20.28■□□□□ 0.84
Trim47-202ENSMUST00000106441 Dnajc21E9Q8D0 531 aa20.27■□□□□ 0.84
Trim47-202ENSMUST00000106441 Glra4Q61603 456 aa20.27■□□□□ 0.84
Trim47-202ENSMUST00000106441 Hsd3b7Q9EQC1 369 aa20.27■□□□□ 0.84
Trim47-202ENSMUST00000106441 Acot3Q9QYR7 432 aa20.27■□□□□ 0.84
Trim47-202ENSMUST00000106441 Ddx23D3Z0M9 819 aaKnown RBP20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Sept2P42208 361 aaKnown RBP20.27■□□□□ 0.83
Trim47-202ENSMUST00000106441 Ccdc148Q6P5U8 527 aa20.27■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms