RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Krt86P97861 486 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 AdalQ80SY6 360 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Rbm41Q8JZV4 413 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tspyl4Q8VD63 406 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Xpo6Q924Z6 1125 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Abcf2Q99LE6 628 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Snx24Q9CRB0 169 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Klf15Q9EPW2 415 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Fut8Q9WTS2 575 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cfap74Q3UY96 1578 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Idh1O88844 414 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lig1P37913 916 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pik3caP42337 1068 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc44a1Q6X893 653 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Jade1Q6ZPI0 834 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Heatr3Q8BQM4 679 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Msantd4Q91YU3 345 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Hic2Q9JLZ6 619 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ecel1Q9JMI0 775 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 GdaQ9R111 454 aa11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Noc2lQ9WV70 747 aaKnown RBP11.11□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dnaaf5B9EJR8 853 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 CaluO35887 315 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Kcna3P16390 528 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Fen1P39749 378 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Wee1P47810 646 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Snrpa1P57784 255 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gtpbp6Q3U6U5 514 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Trpc6Q61143 930 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pgm1Q9D0F9 562 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 PalmdQ9JHU2 551 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 P4hbP09103 509 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tmem165P52875 323 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Prpf38aQ4FK66 312 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Vat1lQ80TB8 417 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ccdc50Q810U5 305 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Def8Q99J78 448 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ap2b1Q9DBG3 937 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dbn1Q9QXS6 706 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Wdr46Q9Z0H1 622 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Stk39Q9Z1W9 556 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mfsd4b4J3QNS5 503 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Pcyt1aP49586 367 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ccdc129Q14B48 1034 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Fam228bQ497Q6 232 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Syne3Q4FZC9 975 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 PapolaQ61183 739 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Sugp2Q8CH09 1067 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Trpm8Q8R4D5 1104 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Txndc9Q9CQ79 226 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Uts2Q9QZQ3 123 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Olfr310B2RVZ1 332 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gm1141B9EJU1 475 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gm21962L7N280 338 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zc3h18Q0P678 948 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dclre1bQ8C7W7 541 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mmgt1Q8K273 131 aaKnown RBP11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mtmr6Q8VE11 617 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dach2Q925Q8 634 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Mrpl40Q9Z2Q5 206 aa11.1□□□□□ -0.63
Lig4-201ENSMUST00000095476 Zmynd8A2A484 1235 aaKnown RBP11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc3a2P10852 526 aaKnown RBP11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tmod1P49813 359 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 InhbaQ04998 424 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cyp24a1Q64441 514 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cdca7Q9D0M2 382 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Irs4Q9Z0Y7 1216 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Dnmt1P13864 1620 aaKnown RBP11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 IkbkbO88351 757 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Ric8aQ3TIR3 530 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc9a2Q3ZAS0 814 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Usp17leQ7M764 540 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Acad11Q80XL6 779 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Kirrel3Q8BR86 778 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Trip10Q8CJ53 603 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Kiaa1024Q8K3V7 917 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gimap4Q99JY3 219 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 MesdQ9ERE7 224 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Lrrc4bP0C192 709 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 D1Pas1P16381 660 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Card10P58660 1021 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tmem232Q5K6N0 675 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Nuak1Q641K5 658 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc7a6osQ7TPE5 306 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 PodnQ7TQ62 611 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Angptl2Q9R045 493 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 GsdmeQ9Z2D3 512 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Krt78E9Q0F0 1068 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Klc1O88447 541 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Cops6O88545 324 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Slc4a1P04919 929 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Gnat1P20612 350 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Tab3Q571K4 716 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Drc3Q9D5E4 523 aa11.09□□□□□ -0.63
Lig4-201ENSMUST00000095476 Atp2c2A7L9Z8 944 aa11.08□□□□□ -0.64
Lig4-201ENSMUST00000095476 Apol7bB1AQP7 369 aa11.08□□□□□ -0.64
Lig4-201ENSMUST00000095476 Cyth3O08967 399 aa11.08□□□□□ -0.64
Lig4-201ENSMUST00000095476 Smarcad1Q04692 1021 aa11.08□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ctdnep1Q3TP92 244 aa11.08□□□□□ -0.64
Lig4-201ENSMUST00000095476 Atp4aQ64436 1033 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms