RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Rwdd2aQ9D9S3 292 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Arl6ip4Q9JM93 229 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rps6ka4Q9Z2B9 773 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Samd15F6XZJ7 620 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 GnaqP21279 359 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gad1P48318 593 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hdgfl1Q2VPR5 283 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tmtc1Q3UV71 942 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cnnm4Q69ZF7 771 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 WhrnQ80VW5 918 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ccdc172Q810N9 267 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Spata2Q8K004 515 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lmbrd1Q8K0B2 537 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mtmr9Q9Z2D0 545 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Myh3P13541 1940 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Proca1B0QZF7 307 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 KhsrpQ3U0V1 748 aaKnown RBP12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sh3gl1Q62419 368 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ankrd13dQ6PD24 605 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Haus4Q8BFT2 363 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 AopepQ8BXQ6 817 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mmgt1Q8K273 131 aaKnown RBP12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Creb3l3Q91XE9 479 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ccdc88aQ5SNZ0 1873 aa12.78□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lrrc32G3XA59 663 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tcp1P11983 556 aaKnown RBP12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cd44P15379 778 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Nsrp1Q5NCR9 542 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 NfrkbQ6PIJ4 1296 aaKnown RBP12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Igdcc3Q8BQC3 813 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sumf1Q8R0F3 372 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 ParnQ8VDG3 624 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rhobtb3Q9CTN4 611 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Dydc2Q9D3X8 139 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Serpinb12Q9D7P9 423 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 AllcQ9JHX6 414 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tnip1Q9WUU8 647 aa12.77□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Akr1b1P45376 316 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tnni3kQ5GIG6 834 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sdccag8Q80UF4 717 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ankrd24Q80VM7 985 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Armcx3Q8BHS6 379 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Morc2bQ8C5W4 1022 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Fermt3Q8K1B8 665 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ube2sQ921J4 223 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sertad1Q9JL10 236 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Peak1Q69Z38 1735 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Mboat4P0C7A3 435 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Gna15P30678 374 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Hsd17b1P51656 344 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Trim43aQ3TL54 445 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Spg7Q3ULF4 781 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rnf207Q3V3A7 635 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nlrp2Q4PLS0 1046 aaKnown RBP12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Pacsin1Q61644 441 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tlr13Q6R5N8 991 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tmem179Q8BHH9 233 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Cdk8Q8R3L8 464 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ifih1Q8R5F7 1025 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kremen1Q99N43 473 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Tsnaxip1Q99P25 704 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ubxn6Q99PL6 442 aa12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Eef1gQ9D8N0 437 aaKnown RBP12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 SetQ9EQU5 289 aaKnown RBP12.77□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Vmn2r78K7N6U5 853 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 HelqQ2VPA6 1069 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Phf8Q80TJ7 1023 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Traf3ip3Q8C0G2 513 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kiaa0319lQ8K135 1048 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Amhr2Q8K592 568 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ddx47Q9CWX9 455 aaKnown RBP12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nxnl2Q9D531 156 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ascc1Q9D8Z1 356 aaKnown RBP12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Znf704Q9ERQ3 566 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 GsdmeQ9Z2D3 512 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lrp5Q91VN0 1614 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Myh15E9Q264 1925 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Gm28510A0A087WP28 240 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Grem2O88273 168 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 P4hbP09103 509 aaKnown RBP12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 DnttP09838 530 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Gna11P21278 359 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Lig1P37913 916 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nr1d1Q3UV55 615 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ttbk2Q3UVR3 1243 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 BC048507Q80ZS7 89 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Onecut3Q8K557 490 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Rab3il1Q8VDV3 383 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Trmt112Q9DCG9 125 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Ptf1aQ9QX98 324 aa12.76□□□□□ -0.37
Col9a1-202ENSMUST00000088349 PltpP55065 493 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 PtgdrP70263 357 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Kctd1Q5M956 257 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Map3k12Q60700 888 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Baiap3Q80TT2 1134 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Slc51bQ80WK2 128 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Krt79Q8VED5 531 aa12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Sf3a3Q9D554 501 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Nol7Q9D7Z3 254 aaKnown RBP12.75□□□□□ -0.37
Col9a1-202ENSMUST00000088349 Smco2Q9DA21 347 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms