RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Parp3Q3ULW8 533 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Jakmip3Q5DTN8 844 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Utp18Q5SSI6 552 aaKnown RBP13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 MycbpapQ5SUV2 932 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Skiv2lQ6NZR5 1244 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Bmp3Q8BHE5 468 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Nipa1Q8BHK1 323 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Calhm6Q8C9E8 313 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 CerkQ8K4Q7 531 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Kbtbd4Q8R179 534 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Rufy3Q9D394 469 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Galntl5Q9D4M9 431 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 FibpQ9JI19 357 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Lypla2Q9WTL7 231 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Arid3bQ9Z1N7 568 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Cops5O35864 334 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 ZbbxQ0P5X5 716 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gpd2Q64521 727 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Smarcc2Q6PDG5 1213 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Cchcr1Q8K2I2 770 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Defb19Q8K3I8 83 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Atp1a4Q9WV27 1032 aa13.92□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Aox1O54754 1333 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Trim30dE9PWL0 497 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gm4788E9Q8B5 879 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Timm44O35857 452 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 MycP01108 439 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 AcrP23578 436 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Glud1P26443 558 aaKnown RBP13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Syt2P46097 422 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ly9Q01965 654 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Znf800Q0VEE6 662 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Meis1Q60954 390 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Fsd1Q7TPM6 496 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Nxf7Q80SZ6 620 aaKnown RBP13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Slc9a7Q8BLV3 726 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Celf3Q8CIN6 465 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 CrygnQ8VHL5 183 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Dusp6Q9DBB1 381 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Limd1Q9QXD8 668 aa13.91□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gm10436L7N1Y3 520 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Trap1aP19473 224 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gna11P21278 359 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 4933427I04RikQ3V053 235 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Rnf207Q3V3A7 635 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Znf652Q5DU09 608 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gm11487Q5RIS0 354 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Kiaa1328Q6NZK5 612 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Kcnk18Q6VV64 394 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Alas1Q8VC19 642 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Col4a3Q9QZS0 1669 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Casp8ap2Q9WUF3 1962 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Szt2A2A9C3 3431 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Atad5Q4QY64 1826 aa13.9□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 March10E9PX79 788 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Ccl26F8VQM2 93 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Gm3383J3QQ59 259 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Capn2O08529 700 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Cyp3a25O09158 503 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Cyp27b1O35084 507 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Aldh1a1P24549 501 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Hoxc13P50207 328 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 NcanP55066 1268 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Cct2P80314 535 aaKnown RBP13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Srebf2Q3U1N2 1130 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Gpatch11Q3UFS4 262 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Ccdc33Q3ULW6 985 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Mtmr10Q7TPM9 771 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Crb2Q80YA8 1282 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 1700001K19RikQ80ZT1 219 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Dnaaf2Q8BPI1 814 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Trmt13Q8BYH3 481 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Yars2Q8BYL4 472 aaKnown RBP13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Mknk2Q8CDB0 459 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Dmtf1Q8CE22 761 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 AnlnQ8K298 1121 aaKnown RBP13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Tmco4Q91WU4 631 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Me2Q99KE1 589 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Rpap3Q9D706 660 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Tle2Q9WVB2 767 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Tmem131O70472 1877 aa13.89□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 BC025446A0A087WQT1 134 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Gm7086A0A1W2P766 342 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Skor2A7M7C7 1008 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 TazI7HJS2 263 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 P01644 108 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 P01645 108 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 P01646 108 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 P01647 108 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Stat1P42225 749 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 EvcP57680 1005 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Mphosph8Q3TYA6 858 aaKnown RBP13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Cdkl5Q3UTQ8 938 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Tnni3kQ5GIG6 834 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Slc27a1Q60714 646 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Nacc1Q7TSZ8 514 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Ago4Q8CJF8 861 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Rufy2Q8R4C2 606 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Etv3Q8R4Z4 513 aa13.88□□□□□ -0.19
Ccdc28a-202ENSMUST00000080860 Bicd2Q921C5 820 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms