RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Ampd3O08739 766 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Klrb1bP27812 223 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Irs1P35569 1233 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Gtf2f1Q3THK3 508 aaKnown RBP12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Lrrc14bQ3UJB3 510 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Foxd1Q61345 456 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Usp49Q6P9L4 685 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Tmem132dQ76HP3 1097 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Cep85Q8BMK0 761 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Btbd7Q8CFE5 1130 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Coa7Q921H9 231 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Mrvi1Q9WUX5 899 aaKnown RBP12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 SktA2AQ25 1946 aaKnown RBP12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Tmem131O70472 1877 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Gm5737A0A140LI11 423 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Dhx15O35286 795 aaKnown RBP12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Cops5O35864 334 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 SfnO70456 248 aaKnown RBP12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Tdo2P48776 406 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Pbxip1Q3TVI8 727 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Zfp957Q3UT76 567 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Lrrc36Q3V0M2 755 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Prmt6Q6NZB1 378 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Atp1a3Q6PIC6 1013 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nap1l3Q794H2 544 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Sun2Q8BJS4 731 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Haus7Q8BKT8 364 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Kcnv2Q8CFS6 562 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Washc1Q8VDD8 475 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Ggps1Q9WTN0 300 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Wdr81Q5ND34 1934 aa12.86□□□□□ -0.35
Clrn1-203ENSMUST00000072551 AW822073A0A0N4SUK1 652 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Gm38392E9Q2A2 434 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Gm10134F6ZQC6 126 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 TazI7HJS2 263 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Gm10436L7N1Y3 520 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Cdc25aP48964 514 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Cyp2c39P56656 490 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Sptlc2P97363 560 aaKnown RBP12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Fam189a2Q4FZH1 290 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Islr2Q5RKR3 745 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Pcdhb14Q6PB90 796 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Dpp9Q8BVG4 862 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Mtmr3Q8K296 1196 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Hexim1Q8R409 356 aaKnown RBP12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Hps3Q91VB4 1002 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Stk38Q91VJ4 465 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Yeats4Q9CR11 227 aaKnown RBP12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Col4a3bpQ9EQG9 624 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Zbtb22Q9Z0G7 638 aa12.85□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nf2P46662 596 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Atp9bP98195 1146 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Muc1Q02496 630 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Slc2a13Q3UHK1 637 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Fdxacb1Q3UY23 622 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Lrrfip1Q3UZ39 729 aaKnown RBP12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Ddx4Q61496 702 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Zfp943Q6NZP4 507 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nim1kQ8BHI9 436 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Srek1Q8BZX4 494 aaKnown RBP12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 PtmsQ9D0J8 101 aaKnown RBP12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Krt85Q9Z2T6 507 aa12.84□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Ms4a4aA0A087WRT7 236 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nkx1-1G3UXB3 402 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Pcdha4O88689 947 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Erbb2P70424 1256 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 4933427I04RikQ3V053 235 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nlrp2Q4PLS0 1046 aaKnown RBP12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Dph1Q5NCQ5 438 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Ccdc189Q6NZQ0 333 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 ShbQ6PD21 503 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nipa1Q8BHK1 323 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Lmbrd1Q8K0B2 537 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Rnf208Q8K0W3 265 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nek9Q8K1R7 984 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Nxf1Q99JX7 618 aaKnown RBP12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Plod3Q9R0E1 741 aa12.83□□□□□ -0.35
Clrn1-203ENSMUST00000072551 Wdr33Q8K4P0 1330 aaKnown RBP12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Dhtkd1A2ATU0 921 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Gm3138K7N754 218 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Grm1P97772 1199 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Znf653Q6YND2 615 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Csrnp2Q8BGQ2 534 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Lrrd1Q8C0R9 853 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Ddx41Q91VN6 622 aaKnown RBP12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Trub2Q91WG3 331 aaKnown RBP12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Scrn1Q9CZC8 414 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Ndufa8Q9DCJ5 172 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Igbp1bQ9QZ29 343 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Acot9Q9R0X4 439 aaKnown RBP12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Nlrc5C3VPR6 1915 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Sbno2Q7TNB8 1349 aa12.83□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Gm3095E9Q058 166 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Ppm1jQ149T7 507 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Rnf207Q3V3A7 635 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Etaa1Q5SVT3 877 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Dhx32Q8BZS9 744 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Trim47Q8C0E3 641 aa12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Nup88Q8CEC0 753 aaKnown RBP12.82□□□□□ -0.36
Clrn1-203ENSMUST00000072551 Vps16Q920Q4 839 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 76.7 ms