RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Olfr1153A2AVC0 318 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Dpy19l1A6X919 746 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Nfil3O08750 462 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Per1O35973 1291 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Itgb3O54890 787 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 P01652 108 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 PmlQ60953 885 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Saxo2Q8BQB6 394 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ablim1Q8K4G5 861 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gtf3c5Q8R2T8 520 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Zkscan3Q91VW9 553 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Cisd2Q9CQB5 135 aaKnown RBP9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Cyp2ab1S4R196 498 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ptch1Q61115 1434 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Supt6hQ62383 1726 aaKnown RBP9.46□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Pak1O88643 545 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 4930502E18RikQ14BQ3 236 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 E2f8Q58FA4 860 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Yars2Q8BYL4 472 aaKnown RBP9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ces1dQ8VCT4 565 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 HnrnprQ8VHM5 632 aaKnown RBP9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Camk2gQ923T9 529 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Cdc42ep3Q9CQC5 254 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Rpl11Q9CXW4 178 aaKnown RBP9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 KelQ9EQF2 713 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Yeats2Q3TUF7 1407 aa9.46□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Trpm1Q2TV84 1622 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Gm3250E9Q1M3 230 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ppef1O35655 650 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Elf1Q60775 612 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Zrsr2Q62377 462 aaKnown RBP9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 OcrlQ6NVF0 900 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ube2r2Q6ZWZ2 238 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Arhgap15Q811M1 481 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Rgs13Q8K443 158 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Arl8aQ8VEH3 186 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Exosc9Q9JHI7 438 aaKnown RBP9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Msl3Q9WVG9 525 aa9.45□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Adrb1P34971 466 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Spire1Q52KF3 598 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 ParpbpQ6IRT3 573 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Gtf2a2Q80ZM7 109 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Lmbrd2Q8C561 694 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Q8CD60 292 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Cbwd1Q8VEH6 393 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Tdrd1Q99MV1 1172 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Map3k6Q9WTR2 1291 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Slurp1Q9Z0K7 110 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Kcnq2Q9Z351 759 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 NpatQ8BMA5 1420 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Cdc42bpgQ80UW5 1551 aa9.44□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Camsap2Q8C1B1 1461 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Atp8a1P70704 1164 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Alkbh5Q3TSG4 395 aaKnown RBP9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Mphosph8Q3TYA6 858 aaKnown RBP9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ddx46Q569Z5 1032 aaKnown RBP9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Vac14Q80WQ2 782 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 HgsQ99LI8 775 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Grk2Q99MK8 689 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Mrps9Q9D7N3 390 aaKnown RBP9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 AcoxlQ9DBS4 632 aa9.43□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Xrn1P97789 1719 aaKnown RBP9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Neurl4Q5NCX5 1563 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Mast1Q9R1L5 1570 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 MypnQ5DTJ9 1315 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Zscan4-ps3A0A1B0GRH6 506 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Slfn8B1ARD8 910 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 AunipE9Q6Z5 340 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Vmn2r12L7N217 831 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Kcnj15O88932 375 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Fam173aQ501J2 229 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Chsy3Q5DTK1 884 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Krt77Q6IFZ6 572 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Slc6a15Q8BG16 729 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Fbxo38Q8BMI0 1194 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Q9D9S1 216 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ccdc97Q9DBT3 340 aa9.42□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Fhod3Q76LL6 1578 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Gm4841E9QAA8 417 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Dnm2P39054 870 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Thbs2Q03350 1172 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Zc3hav1Q3UPF5 946 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 TmpoQ61033 693 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ccsmst1Q6RUT7 136 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Pgrmc2Q80UU9 217 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Ddx42Q810A7 929 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Spon2Q8BMS2 330 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Prss35Q8C0F9 409 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Klhl11Q8CE33 709 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Syt9Q9R0N9 491 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 PygmQ9WUB3 842 aaKnown RBP9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 SphkapQ6NSW3 1687 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Fmn2Q9JL04 1578 aa9.41□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Gm28042B7ZCM9 1014 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Vmn1r175K7N6T9 304 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Igf2bp1O88477 577 aaKnown RBP9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Il4rP16382 810 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 ItkQ03526 625 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Cd244Q07763 397 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Celf4Q7TSY6 486 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms