RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Haus4Q8BFT2 363 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 LRWD1Q8BUI3 648 aaKnown RBP10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Vcpip1Q8CDG3 1220 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Golph3Q9CRA5 298 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Myl7Q9QVP4 175 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tnip1Q9WUU8 647 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 GakQ99KY4 1305 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 DohhA0A1Y7VJ29 135 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 1700016G14RikA0A286YCZ6 238 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ap1m1P35585 423 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Nedd4P46935 887 aaKnown RBP10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tdo2P48776 406 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Opa1P58281 960 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 KaznQ69ZS8 779 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Exoc3Q6KAR6 755 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ddx19bQ8BZY3 494 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ebag9Q9D0V7 213 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tmem191cQ9JJB1 302 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Peg12Q9WVA7 283 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm38392E9Q2A2 434 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Foxn2E9Q7L6 429 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ncf1Q09014 390 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Fam183bQ5NC57 135 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Krt14Q61781 484 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Eid1Q9DCR4 169 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 DexiQ9WUQ7 95 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Herc3A6H6S0 1050 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Skor2A7M7C7 1008 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Men1O88559 611 aaKnown RBP10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pola2P33611 600 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Akr1b1P45376 316 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cacnb3P54285 484 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mybpc2Q5XKE0 1136 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Glra4Q61603 456 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pak2Q8CIN4 524 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Olfr805Q8VFI4 319 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Bap1Q99PU7 728 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ctnnbl1Q9CWL8 563 aaKnown RBP10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trmt44Q9D2Q2 713 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Eef1gQ9D8N0 437 aaKnown RBP10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Nlrp5Q9R1M5 1163 aa10.71□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ulk4Q3V129 1303 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Plekhg2Q6KAU7 1340 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tnks1bp1P58871 1720 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gm3893E9Q1I1 302 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Rtkn2Q14B46 604 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nsrp1Q5NCR9 542 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Specc1Q5SXY1 1067 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 BC048507Q80ZS7 89 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nop53Q8BK35 484 aaKnown RBP10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 BbxQ8VBW5 907 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 SyncQ9EPM5 470 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 GsdmeQ9Z2D3 512 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Aox3G3X982 1335 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 CluhQ5SW19 1315 aa10.71□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Etnk2A7MCT6 385 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 P4hbP09103 509 aaKnown RBP10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Abhd2Q9QXM0 425 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Pabpc1lA2A5N3 607 aaKnown RBP10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Vmn2r68L7N2B3 851 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nr2f2P43135 414 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Stim2P83093 746 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Plekha7Q3UIL6 1118 aaKnown RBP10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Llgl1Q80Y17 1036 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 RadxQ8C779 850 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 LgsnQ8CIX8 563 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lrit1Q8K099 624 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lzts2Q91YU6 671 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Mss51Q9D5Z5 446 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Slfn1Q9Z0I7 337 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Grem2O88273 168 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Vps33bP59016 617 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Jdp2P97875 163 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Rpusd2Q149F1 553 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Kiaa1211Q5PR69 1207 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ccdc189Q6NZQ0 333 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Hook2Q7TMK6 716 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Sash3Q8K352 380 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Eif3cQ8R1B4 911 aaKnown RBP10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 MymkQ9D1N4 221 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cul5Q9D5V5 780 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Krt34Q9D646 392 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Snapc4Q8BP86 1333 aa10.7□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ppp1r9aH3BJD6 1292 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Eftud2O08810 971 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Parp2O88554 559 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ifnar1P33896 590 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gm5169Q5M8P2 212 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 GartQ64737 1010 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Skor1Q8BX46 964 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ppfia4B8QI36 1187 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 RargP18911 458 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ctnna1P26231 906 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 PltpP55065 493 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lrriq3Q14DL3 633 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Sh3gl1Q62419 368 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Adam6bQ6IMH7 756 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Adck2Q6NSR3 617 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 E2f4Q8R0K9 410 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 TbcbQ9D1E6 244 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms