RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Ubn1Q4G0F8 1135 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Swap70Q6A028 585 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Acad11Q80XL6 779 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Map10Q8BJS7 891 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ddx39aQ8VDW0 427 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Pfkfb3A7UAK5 555 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Speer4f2E9Q366 295 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 NsfP46460 744 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Tfcp2l1Q3UNW5 479 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Slc9a2Q3ZAS0 814 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Hoxa13Q62424 386 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Krt12Q64291 487 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Lsm14bQ8CGC4 385 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Q9DAQ4 598 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Zfyve27Q3TXX3 415 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Eif2aQ8BJW6 581 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Serpinb13Q8CDC0 389 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 4931423N10RikQ9D4J9 382 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Dpcr1Q3TNW5 500 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 NfrkbQ6PIJ4 1296 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Slc35f6Q8VE96 372 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 3830403N18RikQ9D6C3 208 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Rnaseh1O70338 285 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Atf2P16951 487 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Cyp19a1P28649 503 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Zscan2Q07230 614 aa13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ddx3yQ62095 658 aaKnown RBP13.6□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Abca6Q8K441 1624 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 A0A286YCQ6 122 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Armc3A2AU72 881 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Flot1O08917 428 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Krt40Q6IFX3 439 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Cnot10Q8BH15 744 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Rcn2Q8BP92 320 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 E330017A01RikQ8BU47 192 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Smc6Q924W5 1097 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Creld2Q9CYA0 350 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Gm7356A0A087WSA6 508 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Nedd9O35177 833 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ift81O35594 676 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Gja8P28236 440 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Slc7a1Q09143 622 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Bank1Q80VH0 783 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ankfy1Q810B6 1169 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ttc26Q8BS45 554 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Arl6ip4Q9JM93 229 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Dnajb7Q9QYI8 312 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Myo1cQ9WTI7 1063 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Gemin5Q8BX17 1502 aaKnown RBP13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Cacnb3P54285 484 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Alx1Q8C8B0 326 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Phf20l1Q8CCJ9 1013 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Kcnq5Q9JK45 933 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Apol11aE9PZG0 334 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Gm3415J3QMS8 315 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 InhbeO08717 350 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Casp12O08736 419 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Eef1bO70251 225 aaKnown RBP13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 CebpaP53566 359 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ccdc160Q3UYG1 323 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Slc17a8Q8BFU8 601 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Rrp1bQ91YK2 724 aaKnown RBP13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Gm3404Q9D506 307 aa13.59□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Lonrf2B2RT44 518 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tbc1d30Q69ZT9 766 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Lonp1Q8CGK3 949 aaKnown RBP13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Q91WD4 421 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Krtap5-3Q9D226 196 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ddx25Q9QY15 484 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Lcmt1A0A0U1RNF2 332 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Gucy1a2F8VQK3 730 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tpp1O89023 562 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Rasgrf1P27671 1262 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Chp1P61022 195 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Arl1P61211 181 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Fhdc1Q3ULZ2 1149 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tmem134Q8R0J4 195 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tada3Q8R0L9 432 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tgs1Q923W1 853 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 AatfQ9JKX4 526 aaKnown RBP13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Orc1Q9Z1N2 840 aaKnown RBP13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Rtel1Q0VGM9 1203 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Usp15Q8R5H1 981 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tmod4Q9JLH8 345 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Mst1rQ62190 1378 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Adgrb3Q80ZF8 1522 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ppfia4B8QI36 1187 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Vmn2r78K7N6U5 853 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 CopeO89079 308 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Xxylt1Q3U4G3 392 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ccna1Q61456 421 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Irak1Q62406 710 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Plcg2Q8CIH5 1265 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Fbxo18Q8K2I9 1042 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Coa7Q921H9 231 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Wdr64Q9D565 1086 aa13.58□□□□□ -0.24
Sdf4-201ENSMUST00000050078 G3bp2P97379 482 aaKnown RBP13.57□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Acot6Q32Q92 419 aa13.57□□□□□ -0.24
Sdf4-201ENSMUST00000050078 AdalQ80SY6 360 aa13.57□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Q8C6G1 249 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms