RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Ttbk2Q3UVR3 1243 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ccdc114Q3UX62 658 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Rsad1Q5SUV1 442 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Plcg2Q8CIH5 1265 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 CpzQ8R4V4 654 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Erlin1Q91X78 346 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Azi2Q9QYP6 405 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Gm1758F6VZZ1 202 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Rfpl4bJ3QPR6 266 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 PurbO35295 324 aaKnown RBP10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ncf1Q09014 390 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Qrich1Q3UA37 777 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Klhdc9Q3USL1 350 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Irak1Q62406 710 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Nyap1Q6PFX7 833 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ccdc43Q9CR29 222 aaKnown RBP10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 DonsonQ9QXP4 560 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Klrc1Q9Z202 244 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Prl2c3P04768 224 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Tcp1P11983 556 aaKnown RBP10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Stim2P83093 746 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Herc4Q6PAV2 1057 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Igdcc3Q8BQC3 813 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Klra17Q9JMA4 273 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Gm11983V9GXS8 105 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Col2a1P28481 1487 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 SynrgQ5SV85 1306 aa10.29□□□□□ -0.76
Usp28-201ENSMUST00000047349 Cetn3O35648 167 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Gna14P30677 355 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Stat4P42228 749 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Igf2bp2Q5SF07 592 aaKnown RBP10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Pcsk7Q61139 770 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Cep70Q6IQY5 616 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ccdc57Q6PHN1 1016 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ddx19bQ8BZY3 494 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Txnrd3Q99MD6 652 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Pth1rP41593 591 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Sh3bp1P55194 680 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Nsun7Q14AW5 724 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Eif4a3Q91VC3 411 aaKnown RBP10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Grin3bQ91ZU9 1003 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Tmem39aQ9CYC3 486 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Myoz2Q9JJW5 264 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 AatfQ9JKX4 526 aaKnown RBP10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Mpp3O88910 568 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Mcm5P49718 733 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Fbxo11Q7TPD1 930 aaKnown RBP10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Slc17a8Q8BFU8 601 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Q8C1R3 189 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ces1Q8VCC2 565 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Smco2Q9DA21 347 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Ifi202Q9R002 445 aa10.28□□□□□ -0.76
Usp28-201ENSMUST00000047349 Nme9A0A1L1SUL6 329 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Apol6B7ZC55 329 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Vsnl1P62761 191 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Mcl1P97287 331 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Tigd5Q499M4 642 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Zrsr2Q62377 462 aaKnown RBP10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Mettl25Q6NXH8 597 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Krit1Q6S5J6 736 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Olfr832Q7TRG9 312 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Vipas39Q8BGQ1 491 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Sugp2Q8CH09 1067 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Lrrc41Q8K1C9 807 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Kremen1Q99N43 473 aa10.27□□□□□ -0.76
Usp28-201ENSMUST00000047349 Trappc11B2RXC1 1133 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Dnajc21E9Q8D0 531 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Pcif1P59114 706 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Cyp2e1Q05421 493 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Tmem232Q5K6N0 675 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Swap70Q6A028 585 aaKnown RBP10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 SpidrQ8BGX7 933 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Mrpl11Q9CQF0 192 aaKnown RBP10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Eid1Q9DCR4 169 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Cwc15Q9JHS9 229 aaKnown RBP10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 DexiQ9WUQ7 95 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Nlrp4cQ3TKR3 982 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Vmn1r209Q5NC97 312 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Ccpg1Q640L3 753 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Thap3Q8BJ25 218 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Slc13a4Q8BZ82 625 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Onecut3Q8K557 490 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Rpap2Q8VC34 614 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Calml4Q91WQ9 153 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Pcdhgc5Q91XW9 944 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Ttc5Q99LG4 440 aa10.27□□□□□ -0.77
Usp28-201ENSMUST00000047349 Gm45208A0A140LJ36 292 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Ankrd35E9Q9D8 996 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Fgd3O88842 733 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Rpl13P47963 211 aaKnown RBP10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Tcerg1lQ3B807 590 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Akap4Q60662 849 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Sdad1Q80UZ2 687 aaKnown RBP10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Ms4a5Q810P8 197 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Ppp1r11Q8K1L5 131 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 PccaQ91ZA3 724 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 IkQ9Z1M8 557 aaKnown RBP10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Tsc2Q61037 1814 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Gm4985A2ALC6 410 aa10.26□□□□□ -0.77
Usp28-201ENSMUST00000047349 Vmn2r78K7N6U5 853 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms