RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Zbtb17Q60821 794 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ahcyl2Q68FL4 613 aaKnown RBP10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ppp2r5dQ91V89 594 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cttnbp2nlQ99LJ0 638 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 AlkP97793 1621 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cd72P21855 354 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 F13a1Q8BH61 732 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Zbtb1Q91VL9 713 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 4931423N10RikQ9D4J9 382 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Rnf14Q9JI90 485 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Col1a2Q01149 1372 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 LtkP08923 888 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 RpsaP14206 295 aaKnown RBP10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Hace1Q3U0D9 909 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 CoasyQ9DBL7 563 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Rmdn1Q9DCV4 305 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 GsdmeQ9Z2D3 512 aa10.67□□□□□ -0.7
Syne1-201ENSMUST00000041639 Clcn6O35454 870 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Stk10O55098 966 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Nlrp4cQ3TKR3 982 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Rgl1Q60695 768 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ppp1r13bQ62415 1087 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Hps6Q8BLY7 805 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ttll1Q91V51 423 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 HnrnpcQ9Z204 313 aaKnown RBP10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Acad11Q80XL6 779 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Mrps22Q9CXW2 359 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Xab2Q9DCD2 855 aaKnown RBP10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gpc4P51655 557 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Fam81aQ3UXZ6 364 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Luc7l3Q5SUF2 432 aaKnown RBP10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Mknk2Q8CDB0 459 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 IcoslgQ9JHJ8 322 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Exoc7O35250 697 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Dab2P98078 766 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 TnnQ80Z71 1560 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Mtrf1lQ8BJU9 373 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Iqcb1Q8BP00 598 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Phf20l1Q8CCJ9 1013 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Pus7lQ8CE46 702 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kdm8Q9CXT6 414 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ndst4Q9EQW8 872 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Slc13a1Q9JHI4 594 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Lrriq4A6H6A4 596 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 OtulinQ3UCV8 352 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 RubcnQ80U62 956 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Trim7Q923T7 510 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Serpina3iD3Z450 408 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ncoa4Q5U4H9 625 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gngt2Q61017 69 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Nuak1Q641K5 658 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 GnptabQ69ZN6 1235 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Adat2Q6P6J0 191 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ppfia2Q8BSS9 1257 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Lsm14bQ8CGC4 385 aaKnown RBP10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gpr108Q91WD0 569 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Dynll2Q9D0M5 89 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Krt34Q9D646 392 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 3830403N18RikQ9D6C3 208 aa10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Hic2Q9JLZ6 619 aaKnown RBP10.66□□□□□ -0.7
Syne1-201ENSMUST00000041639 Col15a1O35206 1367 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Pprc1Q6NZN1 1644 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Skida1Q80YR3 822 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cog5Q8C0L8 829 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Wdr27Q8C5V5 780 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Lrrc59Q922Q8 307 aaKnown RBP10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gfpt1P47856 697 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Srgap2Q91Z67 1071 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 KynuQ9CXF0 464 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cyth3O08967 399 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Tfcp2l1Q3UNW5 479 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 LrmpQ60664 539 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Nrbp2Q91V36 499 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 A0A286YCQ6 122 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cyp11b2P15539 500 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ccdc15Q8C9M2 810 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Epc1Q8C9X6 813 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ces1Q8VCC2 565 aa10.65□□□□□ -0.7
Syne1-201ENSMUST00000041639 C1qbpO35658 278 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Nab2Q61127 525 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Mfap3lQ9D3X9 409 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ccdc182Q9D9C6 152 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Caln1Q9JJG7 219 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 SphkapQ6NSW3 1687 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Plekhg1F6S200 1446 aa10.65□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ckap2Q3V1H1 664 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gm14685Q52KH6 695 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Glra4Q61603 456 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Prpf3Q922U1 683 aaKnown RBP10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 MlklQ9D2Y4 472 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ak9G3UYQ4 1894 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tex13cD3YU32 604 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 ZfaP23607 742 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pabpc4Q6PHQ9 660 aaKnown RBP10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tmem60Q8K174 133 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pomgnt1Q91X88 660 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Slc39a2G3X943 309 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Palb2Q3U0P1 1104 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Q80ZQ3 298 aa10.64□□□□□ -0.71
Syne1-201ENSMUST00000041639 Dpp7Q9ET22 506 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms