RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Trim35Q8C006 501 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Smc6Q924W5 1097 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 AacsQ9D2R0 672 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cnpy3Q9DAU1 276 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cabp5Q9JLK3 173 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Pnpla7A2AJ88 1352 aa11.68□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cep85lA0A1W2P884 806 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 HellsQ60848 821 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ppm1fQ8CGA0 452 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ints9Q8K114 658 aaKnown RBP11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Sgpp1Q9JI99 430 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ybx3Q9JKB3 361 aaKnown RBP11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Noc2lQ9WV70 747 aaKnown RBP11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cpb1B2RS76 415 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nr5a1P33242 462 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nlrp1aQ2LKU9 1182 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Myo6Q64331 1265 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ripor2Q80U16 1078 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Phf23Q8BSN5 401 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Zfp449Q8CB76 518 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Hs2st1Q8R3H7 356 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Trim59Q922Y2 403 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ranbp17Q99NF8 1088 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Slc40a1Q9JHI9 570 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 FibpQ9JI19 357 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tnks1bp1P58871 1720 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Dlg5E9Q9R9 1921 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Adcy9P51830 1353 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rexo5D3YW29 759 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Parp2O88554 559 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tom1O88746 492 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 XlrP05531 208 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 HalP35492 657 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Exosc10P56960 887 aaKnown RBP11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Palb2Q3U0P1 1104 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 OplahQ8K010 1288 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Olfr805Q8VFI4 319 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nphs1Q9QZS7 1256 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rsrc2A2RTL5 376 aaKnown RBP11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cetn3O35648 167 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Snx12O70493 165 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nap1l2P51860 460 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Krt42Q6IFX2 452 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Wdr91Q7TMQ7 748 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Taok3Q8BYC6 898 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Dnajc3Q91YW3 504 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Scrn1Q9CZC8 414 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Dynll2Q9D0M5 89 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Sept3Q9Z1S5 350 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gfpt2Q9Z2Z9 682 aa11.67□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Zfp142G5E869 1843 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gja8P28236 440 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Stim2P83093 746 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Sptlc3Q8BG54 563 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 PreplQ8C167 725 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rcor2Q8C796 523 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Parp10Q8CIE4 960 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Vps37bQ8R0J7 285 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Abhd8Q8R0P8 439 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gpaa1Q9WTK3 621 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 CraddO88843 199 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Armc2Q3URY6 854 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Rbbp5Q8BX09 538 aaKnown RBP11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tmem63cQ8CBX0 802 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Glrx3Q9CQM9 337 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Syf2Q9D198 242 aaKnown RBP11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Marf1Q8BJ34 1730 aaKnown RBP11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 IkbkbO88351 757 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ppp2r5cQ60996 524 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Glis3Q6XP49 780 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ccdc91Q9D8L5 442 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Telo2Q9DC40 840 aaKnown RBP11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ndst4Q9EQW8 872 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Nr2e3Q9QXZ7 395 aa11.66□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Arhgap42B2RQE8 841 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ccdc170D3YXL0 722 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Kif23E9Q5G3 953 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gimap9G3X987 291 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gm6121L7MUF1 212 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Stk10O55098 966 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Tdo2P48776 406 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Lrrn4P59383 733 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Jdp2P97875 163 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Zc3h12cQ5DTV4 884 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Fkbp3Q62446 224 aaKnown RBP11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Gm5622Q810Q0 167 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Fam118bQ8C569 351 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cdan1Q8CC12 1239 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ccdc28aQ8CEI3 192 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Txndc5Q91W90 417 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Mettl13Q91YR5 698 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Acot3Q9QYR7 432 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cyp3a57D3YYZ0 503 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Kdm7aQ3UWM4 940 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Cacna2d2Q6PHS9 1154 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Hirip3Q8BLH7 601 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Adamts2Q8C9W3 1213 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 P3h4Q8K2B0 443 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Ophn1Q99J31 802 aa11.65□□□□□ -0.54
Rnf40-201ENSMUST00000033088 Myl7Q9QVP4 175 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms