RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Terf2ipQ91VL8 393 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Apobec3Q99J72 440 aaKnown RBP13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Nr2e3Q9QXZ7 395 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Wdr33Q8K4P0 1330 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dhtkd1A2ATU0 921 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 EdnrbP48302 442 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cyp2c38P56655 490 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 B230104I21RikQ3USW4 141 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Rnf207Q3V3A7 635 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Slc9a1Q61165 820 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Fscn1Q61553 493 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cyp4x1Q6A152 507 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Skiv2lQ6NZR5 1244 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 P2ry10Q8BFU7 328 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Q8C5S3 137 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Mknk2Q8CDB0 459 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Adgrg2Q8CJ12 1009 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ago4Q8CJF8 861 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tmem60Q8K174 133 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Champ1Q8K327 802 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Vmn1r191Q8K4D0 298 aa12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ddx50Q99MJ9 734 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tmem265E9Q8G3 109 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Olfr67F8VPJ8 320 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Trap1aP19473 224 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Wnt7aP24383 349 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 PuraP42669 321 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Fam109bQ14B98 259 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kmt5bQ3U8K7 883 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Esyt3Q5DTI8 891 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Meis1Q60954 390 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Phlda1Q62392 405 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Acnat2Q8BGG9 420 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Wbp1lQ8BGW2 348 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 LRWD1Q8BUI3 648 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 NkrfQ8BY02 690 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Smoc2Q8CD91 447 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Atp2a1Q8R429 994 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 CrygnQ8VHL5 183 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tmco4Q91WU4 631 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Nxf1Q99JX7 618 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ftsj3Q9DBE9 838 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 FibpQ9JI19 357 aa12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 AdnpQ9Z103 1108 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Sbno2Q7TNB8 1349 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Slc6a21A0A1B0GSD2 748 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cpb1B2RS76 415 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ccdc78D3Z5T1 437 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 TazI7HJS2 263 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Smarce1O54941 411 aaKnown RBP12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dnm1P39053 867 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tdo2P48776 406 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Nap1l2P51860 460 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Psmc6P62334 389 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Samd11Q1RNF8 542 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kcnk18Q6VV64 394 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 PicalmQ7M6Y3 660 aaKnown RBP12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cyfip1Q7TMB8 1253 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Bmp3Q8BHE5 468 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Agbl2Q8CDK2 862 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Adnp2Q8CHC8 1165 aaKnown RBP12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Alas1Q8VC19 642 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Bicd2Q921C5 820 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Eif4e3Q9DBB5 207 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Arpp21Q9DCB4 807 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kcnh7Q9ER47 1195 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tfr2Q9JKX3 798 aa12.97□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Col4a3Q9QZS0 1669 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Aox1O54754 1333 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tex13cD3YU32 604 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dhx15O35286 795 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cep126Q0VBV7 1103 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Palb2Q3U0P1 1104 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tp53i13Q5F267 385 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tnpo1Q8BFY9 898 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Trmt13Q8BYH3 481 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dhx32Q8BZS9 744 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kcnv2Q8CFS6 562 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Crlf2Q8CII9 359 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Appl2Q8K3G9 662 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Wasf1Q8R5H6 559 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Gripap1Q8VD04 806 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ddx39aQ8VDW0 427 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Znf704Q9ERQ3 566 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Lypla2Q9WTL7 231 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Scnn1bQ9WU38 638 aa12.96□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Nlrc5C3VPR6 1915 aa12.96□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Zfp804bA0A0G2JGH6 1343 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Lamb2Q61292 1799 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Supt3B0QZW4 406 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Trim12cD3Z3L3 497 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Gm10436L7N1Y3 520 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mov10P23249 1004 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Mcm3P25206 812 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 GaaP70699 953 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Znf865Q3U3I9 1058 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Kiaa1328Q6NZK5 612 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Arhgap8Q9CXP4 425 aa12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Pabpc6Q9D4E6 643 aaKnown RBP12.95□□□□□ -0.34
Ccdc28b-201ENSMUST00000030586 Wdr64Q9D565 1086 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms