RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Ppm1aP49443 382 aa23.15■■□□□ 1.3
Ttc39b-201ENSMUST00000030205 Nlrx1Q3TL44 975 aa23.15■■□□□ 1.3
Ttc39b-201ENSMUST00000030205 Dis3lQ8C0S1 1053 aa23.15■■□□□ 1.3
Ttc39b-201ENSMUST00000030205 Gpr108Q91WD0 569 aa23.15■■□□□ 1.3
Ttc39b-201ENSMUST00000030205 Cnpy3Q9DAU1 276 aa23.15■■□□□ 1.3
Ttc39b-201ENSMUST00000030205 Tbkbp1A2A9T0 611 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 ScapQ6GQT6 1276 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Cwf19l2Q8BG79 887 aaKnown RBP23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Tmco4Q91WU4 631 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Rassf3Q99P51 232 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Atp6ap2Q9CYN9 350 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 CenppQ9CZ92 286 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Galntl5Q9D4M9 431 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Eif4e3Q9DBB5 207 aa23.14■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Calm1P0DP26 149 aaKnown RBP23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Calm2P0DP27 149 aaKnown RBP23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Calm3P0DP28 149 aaKnown RBP23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 EdnrbP48302 442 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Sox1P53783 391 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Syce2Q505B8 171 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Actn1Q7TPR4 892 aaKnown RBP23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Galnt17Q7TT15 598 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 NcaphQ8C156 731 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Havcr2Q8VIM0 281 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Grin3bQ91ZU9 1003 aa23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Mad1l1Q9WTX8 717 aaKnown RBP23.13■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Gm4758L7N258 96 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Itgb5O70309 798 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 P01644 108 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 P01645 108 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 P01646 108 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 P01647 108 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 RabggtbP53612 339 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Kcnn2P58390 839 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 ZbbxQ0P5X5 716 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Gtf2a2Q80ZM7 109 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Triml1Q8BVP1 470 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 ClmnQ8C5W0 1052 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 SltmQ8CH25 1031 aaKnown RBP23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Ttc9bQ9D6E4 239 aa23.12■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Dhtkd1A2ATU0 921 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Rnf207Q3V3A7 635 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Carmil2Q3V3V9 1296 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Nxf1Q99JX7 618 aaKnown RBP23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Pus10Q9D3U0 527 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Cul5Q9D5V5 780 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 KnstrnQ9D9Z1 312 aaKnown RBP23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Acox2Q9QXD1 681 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Hmg20bQ9Z104 317 aa23.11■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Piezo2Q8CD54 2822 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Meis2P97367 477 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Lrrc55Q3UY51 311 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Rnf20Q5DTM8 973 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Smarcc2Q6PDG5 1213 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Casc1Q6TDU8 730 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Cdan1Q8CC12 1239 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Smc5Q8CG46 1101 aaKnown RBP23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 DymQ8CHY3 669 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Ddx39aQ8VDW0 427 aaKnown RBP23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Adcy3Q8VHH7 1145 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Adam33Q923W9 797 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Npm3Q9CPP0 175 aaKnown RBP23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Susd3Q9D176 269 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Gpaa1Q9WTK3 621 aa23.1■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 A0A1Y7VML8 143 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Kcna1P16388 495 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 March9Q3TZ87 348 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Gm11487Q5RIS0 354 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Crtc1Q68ED7 630 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Arrdc3Q7TPQ9 414 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Agbl3Q8CDP0 1006 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Tshz3Q8CGV9 1081 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Oit3Q8R4V5 546 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Atg13Q91YI1 516 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 1700129C05RikQ9CQ77 218 aa23.09■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Gm7086A0A1W2P766 342 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Arhgap4B1AUY3 965 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 DgkhD3YXJ0 1156 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Zc3h7bF8VPP8 982 aaKnown RBP23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Cnnm3Q32NY4 713 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Bhmt2Q91WS4 363 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Ppp6r3Q922D4 844 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 Arhgap8Q9CXP4 425 aa23.08■■□□□ 1.29
Ttc39b-201ENSMUST00000030205 LctF8VPT3 1931 aa23.08■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 MthfslL7N466 203 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Map7O88735 730 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 P04214 136 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Gm21985Q6P6P5 1106 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Usp38Q8BW70 1042 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Prrg2Q8R182 198 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Ubac1Q8VDI7 409 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Akirin1Q99LF1 191 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Col25a1Q99MQ5 666 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Mkrn2Q9ERV1 416 aaKnown RBP23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 FibpQ9JI19 357 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Stk39Q9Z1W9 556 aa23.07■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Sptlc1O35704 473 aa23.06■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Nedd1P33215 660 aa23.06■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Tdo2P48776 406 aa23.06■■□□□ 1.28
Ttc39b-201ENSMUST00000030205 Dalrd3Q6PJN8 538 aa23.06■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms