RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Traf5P70191 558 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Erich4Q3UNU4 136 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tshz1Q5DTH5 1084 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Sp4Q62445 782 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Kbtbd4Q8R179 534 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 PappaQ8R4K8 1624 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Serpina1aP07758 413 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Serpina1bP22599 413 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Aco1P28271 889 aaKnown RBP9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Stat4P42228 749 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Opa1P58281 960 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Serpina1cQ00896 412 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Serpina1dQ00897 413 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gbp4Q61107 620 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Slc4a8Q8JZR6 1089 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lrrc41Q8K1C9 807 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Adcy3Q8VHH7 1145 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cfap57Q9D180 1249 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cmtr1Q9DBC3 837 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Sertad1Q9JL10 236 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Pstpip1P97814 415 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ift20Q61025 132 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Trub2Q91WG3 331 aaKnown RBP9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Dnaaf5B9EJR8 853 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Exoc3l2D3YUP5 789 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tph1P17532 447 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 CoasyQ9DBL7 563 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rilpl1Q9JJC6 406 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Prpf40aQ9R1C7 953 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gm28042B7ZCM9 1014 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 CtshP49935 333 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mcl1P97287 331 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 1810065E05RikQ5NC41 235 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 AlcamQ61490 583 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cep70Q6IQY5 616 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lrrn2Q6PHP6 730 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Wdr3Q8BHB4 942 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ciapin1Q8WTY4 309 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Smc1aQ9CU62 1233 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Pex11aQ9Z211 246 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Frmd8Q3UFK8 466 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mier3Q3UHF3 551 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ccdc57Q6PHN1 1016 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tmem132dQ76HP3 1097 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Iqcb1Q8BP00 598 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ttc26Q8BS45 554 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Vps52Q8C754 723 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ccdc28aQ8CEI3 192 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Slc18a1Q8R090 521 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cd248Q91V98 765 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Atp5c1Q91VR2 298 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rrp1bQ91YK2 724 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Apobec3Q99J72 440 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mss51Q9D5Z5 446 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Flt1P35969 1333 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gm36210A0A1B0GS00 229 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 C87977A2A958 498 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rasal2E9PW37 1286 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Kcna1P16388 495 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Kcnj4P52189 445 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Trpc6Q61143 930 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Slc7a6osQ7TPE5 306 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lrsam1Q80ZI6 727 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 AdarQ99MU3 1178 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Dnajc7Q9QYI3 494 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Acot3Q9QYR7 432 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Apol6B7ZC55 329 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Snx12O70493 165 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Idh1O88844 414 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 GartQ64737 1010 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Arhgef18Q6P9R4 1021 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nucks1Q80XU3 234 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Pdzph1Q8BGR1 1238 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Eif4a3Q91VC3 411 aaKnown RBP9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 BaatQ91X34 420 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mtmr9Q9Z2D0 545 aa9.32□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Scgb2b18A0A087WPA9 112 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 A0A286YCQ6 122 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tmem35bQ3U0Y2 150 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Trim37Q6PCX9 961 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Clca4aQ6Q473 924 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ctnnbl1Q9CWL8 563 aaKnown RBP9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ribc1Q9D0B8 379 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Eif2ak1Q9Z2R9 619 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ank1Q02357 1862 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gm2030D3Z7C4 212 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ppef2O35385 757 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Rps6ka1P18653 724 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Acad11Q80XL6 779 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Scyl2Q8CFE4 930 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Themis2Q91YX0 663 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 1700018B08RikQ9DA83 213 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Usp14Q9JMA1 493 aaKnown RBP9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Atp8b5A3FIN4 1183 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Trim30cD3YVI9 513 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ttbk2Q3UVR3 1243 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Spata2Q8K004 515 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cdk17Q8K0D0 523 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Saal1Q9D2C2 474 aa9.31□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cacnb3P54285 484 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms