RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Stxbp3Q60770 592 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Tsg101Q61187 391 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Rexo1Q7TT28 1213 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Leng8Q8CBY3 785 aaKnown RBP16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Gdap1l1Q8VE33 370 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Smtnl1Q99LM3 459 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Hsd3b7Q9EQC1 369 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 AdnpQ9Z103 1108 aaKnown RBP16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Tal1P22091 329 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Vcam1P29533 739 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Nlrx1Q3TL44 975 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Eme2Q56A04 373 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Scnn1aQ61180 699 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 PigsQ6PD26 555 aaKnown RBP16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Tlr13Q6R5N8 991 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Krit1Q6S5J6 736 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Olfr832Q7TRG9 312 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Bpifb6Q8BU51 449 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Fam43aQ8BUP8 424 aa16.68■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Pitpnm2Q6ZPQ6 1335 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Lrrcc1Q69ZB0 1026 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Rab11fip4Q8BQP8 635 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Kbtbd4Q8R179 534 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Cacnb1Q8R3Z5 597 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Haus2Q9CQS9 234 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Rwdd2aQ9D9S3 292 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Sept14Q9DA97 430 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Pla2g4eQ50L42 875 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Map3k12Q60700 888 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Vcpip1Q8CDG3 1220 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Slc26a4Q9R155 780 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ankrd13cQ3UX43 541 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Kiaa1024Q8K3V7 917 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Psmd2Q8VDM4 908 aa16.67■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 JcadQ5DTX6 1320 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Men1O88559 611 aaKnown RBP16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Akr1b1P45376 316 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ift74Q8BKE9 600 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Dnajc21E9Q8D0 531 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Rfpl4bJ3QPR6 266 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Eif3j1Q3UGC7 261 aaKnown RBP16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Eif3j2Q66JS6 263 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 NkrfQ8BY02 690 aaKnown RBP16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Mboat7Q8CHK3 473 aa16.66■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Gm4985A2ALC6 410 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Usp17lbE9Q9U0 468 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Capn2O08529 700 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Chrna5Q2MKA5 467 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Ddx19bQ8BZY3 494 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Golga5Q9QYE6 729 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Kcnma1Q08460 1209 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Slc2a13Q3UHK1 637 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 March6Q6ZQ89 909 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 BC048507Q80ZS7 89 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Dennd2aQ8C4S8 1000 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Dnajc17Q91WT4 303 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 NapaQ9DB05 295 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Cacnb3P54285 484 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Stim2P83093 746 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Prl7b1Q8CGZ9 251 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 2310002L09RikQ9D7L5 217 aa16.65■□□□□ 0.26
Nkx3-1-201ENSMUST00000022646 Map7d2A2AG50 781 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Actn4P57780 912 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Fbln1Q08879 705 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Rasa3Q60790 834 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nell2Q61220 819 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Secisbp2lQ6A098 1086 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Drd5Q8BLD9 478 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Traf3ip3Q8C0G2 513 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Sh2b1Q91ZM2 756 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Stat3P42227 770 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Atp6v1aP50516 617 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nlrp2Q4PLS0 1046 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Zmynd15Q8C0R7 736 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Csgalnact2Q8C1F4 542 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Yipf1Q91VU1 306 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 CoasyQ9DBL7 563 aa16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Zcchc17Q9ESX4 241 aaKnown RBP16.64■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Cyp2e1Q05421 493 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Qrich1Q3UA37 777 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 WaplQ65Z40 1200 aaKnown RBP16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Igsf3Q6ZQA6 1194 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 WdpcpQ8C456 722 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Bbs7Q8K2G4 715 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Matr3Q8K310 846 aaKnown RBP16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Gtf3c5Q8R2T8 520 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 RnmtQ9D0L8 465 aaKnown RBP16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ptf1aQ9QX98 324 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Spocd1B1ASB6 936 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Pcif1P59114 706 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tbc1d9bQ5SVR0 1263 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Herc4Q6PAV2 1057 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Armc6Q8BNU0 468 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tesk2Q8VCT9 570 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Olfr805Q8VFI4 319 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Ddah1Q9CWS0 285 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Tex21Q9R0U9 575 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Mtmr2Q9Z2D1 643 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Rfc1P35601 1131 aa16.63■□□□□ 0.25
Nkx3-1-201ENSMUST00000022646 Nsun7Q14AW5 724 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms