RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	MSS4	P38994	779 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	PDS1	P40316	373 aa	Predicted RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	PFD1	P46988	109 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	RBL2	P48606	106 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	YGL114W	P53134	725 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	YNR065C	P53751	1116 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	MMT1	Q03218	510 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	PPM1	Q04081	328 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	MED2	Q12124	431 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	UBX3	Q12229	455 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	YBR126W-A	Q8TGU7	68 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	RIM15	P43565	1770 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	VPS63	O13549	108 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	DCD1	P06773	312 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	ERG20	P08524	352 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	MATALPHA1	P0CY06	175 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	HMLALPHA1	P0CY07	175 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	PCK1	P10963	549 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	ARO3	P14843	370 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	KRS1	P15180	591 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	TYR1	P20049	452 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	CPR2	P23285	205 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	SNT1	P25357	1226 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	CSM1	P25651	190 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	RPC19	P28000	142 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	TRK2	P28584	889 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	MVD1	P32377	396 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	YKL070W	P36087	169 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	LDH1	P38139	375 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	ECM8	P38246	354 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	SEO1	P39709	593 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	SER3	P40054	469 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	VRG4	P40107	337 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	HIT1	P46973	164 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	ADI1	Q03677	179 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	RSM24	Q03976	319 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	SNO4	Q04902	237 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	CTS2	Q06350	511 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	HDA3	Q06623	655 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	HSP33	Q08914	237 aa	Known RBP	4.81	□□□□□ -1.64
PXA1	YPL147W	HSP32	Q08992	237 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	YOR111W	Q99210	232 aa		4.81	□□□□□ -1.64
PXA1	YPL147W	RPL35A	P0CX84	120 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	RPL35B	P0CX85	120 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	GLN4	P13188	809 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	ERG6	P25087	383 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	ADP1	P25371	1049 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	CCR4	P31384	837 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	APT2	P36973	181 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	SBE22	P38814	852 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	RGI1	P40043	161 aa	Predicted RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	TFG2	P41896	400 aa	Predicted RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	ALY2	P47029	1046 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	YGR127W	P53275	312 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	NMA111	P53920	997 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	MOT3	P54785	490 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	HLR1	Q04429	423 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	DPL1	Q05567	589 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	GPM2	Q12008	311 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	RCN2	Q12044	265 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	UBC1	P21734	215 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	RPB10	P22139	70 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	GCG1	P32656	232 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	SPO23	P33757	523 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	ELF1	P36053	145 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PXA1	YPL147W	END3	P39013	349 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	SAD1	P43589	448 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	RMD9	P53140	646 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	RHO3	Q00245	231 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	ACS1	Q01574	713 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	ARX1	Q03862	593 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	CDA2	Q06703	312 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	DCI1	Q08558	271 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	TUM1	Q08686	304 aa	Known RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	LEA1	Q08963	238 aa	Predicted RBP	4.8	□□□□□ -1.64
PXA1	YPL147W	RIM20	Q12033	661 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	FYV7	Q12247	151 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	AGC1	Q12482	902 aa		4.8	□□□□□ -1.64
PXA1	YPL147W	RNR2	P09938	399 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	ZWF1	P11412	505 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	NSP1	P14907	823 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	SPR1	P32603	445 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	RIB5	P38145	238 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	YBR284W	P38150	797 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	SPC97	P38863	823 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	ECM10	P39987	644 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	YMR134W	P40207	237 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	RPS7B	P48164	190 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	EBS1	Q03466	884 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	CDC123	Q05791	360 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	RGC1	Q06108	1083 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	RRP40	Q08285	240 aa	Known RBP	4.79	□□□□□ -1.64
PXA1	YPL147W	NRT1	Q08485	598 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	TSC13	Q99190	310 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	PET20	Q99373	253 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	SCEI	P03882	235 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	MAS1	P10507	462 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	ERV1	P27882	189 aa		4.79	□□□□□ -1.64
PXA1	YPL147W	GLY1	P37303	387 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms