RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	RAD14	P28519	371 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	MMS4	P38257	691 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	YMR124W	P39523	943 aa	Known RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	ZPR1	P53303	486 aa	Known RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	VPS9	P54787	451 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	YMR160W	Q03823	816 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	DON1	Q05610	365 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	RTT109	Q07794	436 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	YLR111W	Q12528	110 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	BUD3	P25558	1636 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	BNR1	P40450	1375 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	PUT2	P07275	575 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	TUB1	P09733	447 aa	Known RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	CPR2	P23285	205 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	BUD5	P25300	642 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	RML2	P32611	393 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	CAJ1	P39101	391 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	MBB1	P39534	108 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	OCA1	P50946	238 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	SWF1	Q04629	336 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	SMF3	Q12078	473 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX6	YNL329C	NFI1	Q12216	726 aa		3.17	□□□□□ -1.9
PEX6	YNL329C	PDE2	P06776	526 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	YMR085W	P0CF18	432 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	ELO2	P25358	347 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	BUD14	P27637	709 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	BRF1	P29056	596 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	MIA40	P36046	403 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	RMD9	P53140	646 aa	Known RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	BUD32	P53323	261 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	ASI1	P54074	624 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	YDR286C	Q05530	114 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	YLR456W	Q06199	204 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	STF1	P01098	86 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	SPS4	P09937	338 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	RRP7	P25368	297 aa	Predicted RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	YKL023W	P36103	277 aa	Known RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	CBP4	P37267	147 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	BNA4	P38169	460 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	POP2	P39008	433 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	ALK1	P43633	760 aa	Known RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	AIM22	P47051	409 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	MEH1	Q02205	184 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	ARP10	Q04549	284 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	PIG1	Q06216	648 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	MCM4	P30665	933 aa	Known RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	SHP1	P34223	423 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
PEX6	YNL329C	FMS1	P50264	508 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	YGR016W	P53209	190 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	MSC1	Q03104	513 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	RSF1	Q05043	376 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	DIS3	Q08162	1001 aa	Known RBP	3.16	□□□□□ -1.9
PEX6	YNL329C	YLR112W	Q12130	139 aa		3.16	□□□□□ -1.9
PEX6	YNL329C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
PEX6	YNL329C	CBP1	P07252	654 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	SEC66	P33754	206 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	SNO3	P43544	222 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	YPT11	P48559	417 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	LYS20	P48570	428 aa	Known RBP	3.15	□□□□□ -1.9
PEX6	YNL329C	LGE1	Q02796	332 aa	Known RBP	3.15	□□□□□ -1.9
PEX6	YNL329C	YMR130W	Q04223	302 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	SSK1	Q07084	712 aa		3.15	□□□□□ -1.9
PEX6	YNL329C	YLR278C	Q05854	1341 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	TRX1	P22217	103 aa	Known RBP	3.15	□□□□□ -1.91
PEX6	YNL329C	THI2	P38141	450 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	SLM4	P38247	162 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	VHC1	P38329	1120 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	YGL108C	P53139	140 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	ERG13	P54839	491 aa	Known RBP	3.15	□□□□□ -1.91
PEX6	YNL329C	YPL014W	Q02606	381 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	HOT1	Q03213	719 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	OSW1	Q08692	278 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	RPN5	Q12250	445 aa	Known RBP	3.15	□□□□□ -1.91
PEX6	YNL329C	FRE7	Q12333	620 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	ISN1	Q99312	450 aa		3.15	□□□□□ -1.91
PEX6	YNL329C	MES1	P00958	751 aa	Known RBP	3.14	□□□□□ -1.91
PEX6	YNL329C	GAL4	P04386	881 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	HIP1	P06775	603 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	ANP1	P32629	500 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	NIP100	P33420	868 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	MTR2	P34232	184 aa	Known RBP	3.14	□□□□□ -1.91
PEX6	YNL329C	WSS1	P38838	269 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	QRI1	P43123	477 aa	Known RBP	3.14	□□□□□ -1.91
PEX6	YNL329C	ATG27	P46989	271 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	YDR415C	Q04033	374 aa	Predicted RBP	3.14	□□□□□ -1.91
PEX6	YNL329C	SOV1	Q04748	898 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	YRF1-1	P0CX20	1796 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	YRF1-5	P0CX21	1796 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	YRF1-8	P0CX22	1796 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	CLB2	P24869	491 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	OPY1	P38271	328 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	EOS1	P53938	366 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	IZH1	Q03419	316 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	ETT1	Q08421	412 aa	Known RBP	3.14	□□□□□ -1.91
PEX6	YNL329C	DNF2	Q12675	1612 aa		3.14	□□□□□ -1.91
PEX6	YNL329C	LTE1	P07866	1435 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	LPD1	P09624	499 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	YAP1	P19880	650 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	CNA1	P23287	553 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms