RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W NDI1P32340 513 aa0.79□□□□□ -2.28
PRP39YML046W MRPL10P36520 322 aa0.79□□□□□ -2.28
PRP39YML046W ARA1P38115 344 aa0.79□□□□□ -2.28
PRP39YML046W MRPS9P38120 278 aa0.79□□□□□ -2.28
PRP39YML046W SEO1P39709 593 aa0.79□□□□□ -2.28
PRP39YML046W GPI1P53306 609 aa0.79□□□□□ -2.28
PRP39YML046W PCD1Q12524 340 aa0.79□□□□□ -2.28
PRP39YML046W VPS15P22219 1454 aa0.79□□□□□ -2.28
PRP39YML046W XRN1P22147 1528 aaKnown RBP0.78□□□□□ -2.28
PRP39YML046W SAL1D6W196 494 aa0.78□□□□□ -2.28
PRP39YML046W BOS1P25385 244 aa0.78□□□□□ -2.28
PRP39YML046W UTR4P32626 227 aa0.78□□□□□ -2.28
PRP39YML046W MNS1P32906 549 aa0.78□□□□□ -2.28
PRP39YML046W TEF4P36008 412 aaKnown RBP0.78□□□□□ -2.28
PRP39YML046W UME6P39001 836 aa0.78□□□□□ -2.28
PRP39YML046W NCA3P46955 337 aa0.78□□□□□ -2.28
PRP39YML046W YJR154WP47181 346 aa0.78□□□□□ -2.28
PRP39YML046W VPS4P52917 437 aa0.78□□□□□ -2.28
PRP39YML046W DSD1P53095 428 aa0.78□□□□□ -2.28
PRP39YML046W HER2Q03557 464 aa0.78□□□□□ -2.28
PRP39YML046W YDL057WQ07379 328 aa0.78□□□□□ -2.28
PRP39YML046W PSK2Q08217 1101 aa0.78□□□□□ -2.28
PRP39YML046W MEC1P38111 2368 aa0.78□□□□□ -2.28
PRP39YML046W NUP170P38181 1502 aa0.78□□□□□ -2.28
PRP39YML046W CNS1P33313 385 aa0.78□□□□□ -2.29
PRP39YML046W STB6P36085 766 aa0.78□□□□□ -2.29
PRP39YML046W RPL32P38061 130 aaKnown RBP0.78□□□□□ -2.29
PRP39YML046W YNG2P38806 282 aaKnown RBP0.78□□□□□ -2.29
PRP39YML046W YHR131CP38835 850 aa0.78□□□□□ -2.29
PRP39YML046W RIC1P40395 1056 aa0.78□□□□□ -2.29
PRP39YML046W PRM5P40476 318 aa0.78□□□□□ -2.29
PRP39YML046W YJR085CP47131 105 aaKnown RBP0.78□□□□□ -2.29
PRP39YML046W MRPL13Q02204 264 aa0.78□□□□□ -2.29
PRP39YML046W INA17Q02888 182 aa0.78□□□□□ -2.29
PRP39YML046W MUB1Q03162 620 aa0.78□□□□□ -2.29
PRP39YML046W PHO92Q06390 306 aa0.78□□□□□ -2.29
PRP39YML046W YPL199CQ08954 240 aa0.78□□□□□ -2.29
PRP39YML046W DYN1P36022 4092 aa0.77□□□□□ -2.29
PRP39YML046W SPP41P38904 1435 aa0.77□□□□□ -2.29
PRP39YML046W BCK1Q01389 1478 aa0.77□□□□□ -2.29
PRP39YML046W PDB1P32473 366 aaKnown RBP0.77□□□□□ -2.29
PRP39YML046W TIM17P39515 158 aa0.77□□□□□ -2.29
PRP39YML046W PFS2P42841 465 aaKnown RBP0.77□□□□□ -2.29
PRP39YML046W AVT4P50944 713 aa0.77□□□□□ -2.29
PRP39YML046W POP6P53218 158 aa0.77□□□□□ -2.29
PRP39YML046W TMA7Q3E764 64 aaKnown RBP0.77□□□□□ -2.29
PRP39YML046W YRF1-2P40105 1681 aa0.77□□□□□ -2.29
PRP39YML046W IML1P47170 1584 aa0.77□□□□□ -2.29
PRP39YML046W MSS18P08593 268 aa0.76□□□□□ -2.29
PRP39YML046W YCL049CP25577 312 aa0.76□□□□□ -2.29
PRP39YML046W NUP2P32499 720 aa0.76□□□□□ -2.29
PRP39YML046W FMT1P32785 401 aa0.76□□□□□ -2.29
PRP39YML046W FRE2P36033 711 aa0.76□□□□□ -2.29
PRP39YML046W FAU1P40099 211 aa0.76□□□□□ -2.29
PRP39YML046W FAR3P46671 204 aa0.76□□□□□ -2.29
PRP39YML046W IRC25Q07951 179 aa0.76□□□□□ -2.29
PRP39YML046W FDH1Q08911 376 aa0.76□□□□□ -2.29
PRP39YML046W ATG2P53855 1592 aa0.76□□□□□ -2.29
PRP39YML046W PSK1P31374 1356 aa0.76□□□□□ -2.29
PRP39YML046W PDR5P33302 1511 aaKnown RBP0.76□□□□□ -2.29
PRP39YML046W SPS22P25380 463 aa0.75□□□□□ -2.29
PRP39YML046W IMG1P25626 169 aa0.75□□□□□ -2.29
PRP39YML046W PTP2P29461 750 aa0.75□□□□□ -2.29
PRP39YML046W IME2P32581 645 aa0.75□□□□□ -2.29
PRP39YML046W GLC7P32598 312 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W YBL055CP34220 418 aaPredicted RBP0.75□□□□□ -2.29
PRP39YML046W YHR210CP38893 341 aa0.75□□□□□ -2.29
PRP39YML046W CIN4P39110 191 aa0.75□□□□□ -2.29
PRP39YML046W SLZ1P40167 298 aa0.75□□□□□ -2.29
PRP39YML046W OGG1P53397 376 aaPredicted RBP0.75□□□□□ -2.29
PRP39YML046W YNR061CP53747 219 aa0.75□□□□□ -2.29
PRP39YML046W MET14Q02196 202 aa0.75□□□□□ -2.29
PRP39YML046W CUE5Q08412 411 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W YRF1-1P0CX20 1796 aa0.75□□□□□ -2.29
PRP39YML046W YRF1-5P0CX21 1796 aa0.75□□□□□ -2.29
PRP39YML046W YRF1-8P0CX22 1796 aa0.75□□□□□ -2.29
PRP39YML046W RAD52P06778 471 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W PWP1P21304 576 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W ALY1P36117 915 aa0.75□□□□□ -2.29
PRP39YML046W PSD1P39006 500 aa0.75□□□□□ -2.29
PRP39YML046W DFG10P40526 253 aa0.75□□□□□ -2.29
PRP39YML046W FLC3P53121 802 aa0.75□□□□□ -2.29
PRP39YML046W MKC7P53379 596 aa0.75□□□□□ -2.29
PRP39YML046W CWC25P53854 179 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W TGL2P54857 326 aa0.75□□□□□ -2.29
PRP39YML046W RBS1Q05672 457 aaKnown RBP0.75□□□□□ -2.29
PRP39YML046W MUM3Q08750 479 aa0.75□□□□□ -2.29
PRP39YML046W YLR278CQ05854 1341 aa0.75□□□□□ -2.29
PRP39YML046W GDB1Q06625 1536 aa0.74□□□□□ -2.29
PRP39YML046W BUD3P25558 1636 aa0.74□□□□□ -2.29
PRP39YML046W GAL1P04385 528 aa0.74□□□□□ -2.29
PRP39YML046W APA1P16550 321 aaKnown RBP0.74□□□□□ -2.29
PRP39YML046W UBC1P21734 215 aaKnown RBP0.74□□□□□ -2.29
PRP39YML046W IFA38P38286 347 aa0.74□□□□□ -2.29
PRP39YML046W MSG5P38590 489 aa0.74□□□□□ -2.29
PRP39YML046W OST1P41543 476 aaKnown RBP0.74□□□□□ -2.29
PRP39YML046W GAB1P41733 394 aa0.74□□□□□ -2.29
PRP39YML046W YOR365CQ08844 703 aa0.74□□□□□ -2.29
PRP39YML046W TCO89Q08921 799 aa0.74□□□□□ -2.29
PRP39YML046W NBP2Q12163 236 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms