RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	ROD1	Q02805	837 aa		5.69	□□□□□ -1.5
SUB2	YDL084W	MSC2	Q03455	724 aa		5.69	□□□□□ -1.5
SUB2	YDL084W	VHS1	Q03785	461 aa		5.69	□□□□□ -1.5
SUB2	YDL084W	YMR027W	Q04371	470 aa		5.69	□□□□□ -1.5
SUB2	YDL084W	NSL1	Q12143	216 aa		5.69	□□□□□ -1.5
SUB2	YDL084W	ERG20	P08524	352 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	APE1	P14904	514 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	ARG8	P18544	423 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	COQ1	P18900	473 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	SLY1	P22213	666 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	BUD5	P25300	642 aa	Predicted RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	ATG22	P25568	528 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	YCL049C	P25577	312 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	ARE1	P25628	610 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	PEP3	P27801	918 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	PMT2	P31382	759 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	IRE1	P32361	1115 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	DAL3	P32459	195 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	GCG1	P32656	232 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	PRX1	P34227	261 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	STB6	P36085	766 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	MAL33	P38157	468 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	PRS2	P38620	318 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	PPE1	P38796	400 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	PIC2	P40035	300 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	RRD1	P40454	393 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	YGR201C	P42936	225 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	SIP4	P46954	829 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	JHD2	P47156	728 aa	Predicted RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	YGL036W	P53185	909 aa	Predicted RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	ERP6	P53198	216 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	RRP46	P53256	223 aa	Predicted RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	TIM44	Q01852	431 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	ARL3	Q02804	198 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	EBS1	Q03466	884 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	YDR222W	Q04925	415 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	CDD1	Q06549	142 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	HIM1	Q06674	414 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	PUN1	Q06991	263 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	NSE1	Q07913	336 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	RAX1	Q08760	435 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	OXR1	Q08952	273 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	CSM4	Q08955	156 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	YLR053C	Q12026	108 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	BAG7	Q12128	409 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	SUL2	Q12325	893 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	GPM3	Q12326	303 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	CMR1	Q12510	522 aa	Known RBP	5.68	□□□□□ -1.5
SUB2	YDL084W	WIP1	Q2V2P8	89 aa		5.68	□□□□□ -1.5
SUB2	YDL084W	VPS15	P22219	1454 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	RPL6B	P05739	176 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	SNA3	P14359	133 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	SRV2	P17555	526 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	PET9	P18239	318 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	RPO26	P20435	155 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	OLE1	P21147	510 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	CLB2	P24869	491 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	LAC1	P28496	418 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	PHA2	P32452	334 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	TGL1	P34163	548 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	YKL071W	P36086	256 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	RPF2	P36160	344 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	FAT1	P38225	669 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	ECM8	P38246	354 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	HSL7	P38274	827 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	AIM18	P38884	321 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	JHD1	P40034	492 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	CSM2	P40465	213 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	PET130	P47065	347 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	NBP1	P52919	319 aa	Predicted RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	UFD1	P53044	361 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	RTA1	P53047	317 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	DSD1	P53095	428 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	GET1	P53192	235 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	IMO32	P53219	342 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	LSC2	P53312	427 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	RHO3	Q00245	231 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	PRP38	Q00723	242 aa	Predicted RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	UTP6	Q02354	440 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	YPL080C	Q02826	108 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	YPL034W	Q03083	165 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	YMR279C	Q03263	540 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	SKY1	Q03656	742 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	YDR249C	Q03787	373 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	VID22	Q05934	901 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	GPN3	Q06543	272 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	ECM30	Q06673	1274 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	GSH2	Q08220	491 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	SFM1	Q12314	213 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	YOL114C	Q12322	202 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	RMP1	Q12530	201 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	AI5_BETA	Q9ZZX0	354 aa		5.67	□□□□□ -1.5
SUB2	YDL084W	ROM2	P51862	1356 aa	Known RBP	5.67	□□□□□ -1.5
SUB2	YDL084W	TY2B-LR1	P0C2J3	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-F	P0CX63	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-GR2	P0CX64	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-C	P25384	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-DR2	Q03494	1770 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY1B-DR1	Q03855	1755 aa		5.66	□□□□□ -1.5
SUB2	YDL084W	TY2B-DR3	Q07791	1770 aa	Known RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms