RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	IVY1	Q04934	453 aa		3.01	□□□□□ -1.93
SRD1	YCR018C	RRP45	Q05636	305 aa	Known RBP	3.01	□□□□□ -1.93
SRD1	YCR018C	YLR281C	Q05863	155 aa		3.01	□□□□□ -1.93
SRD1	YCR018C	SIL1	Q08199	421 aa		3.01	□□□□□ -1.93
SRD1	YCR018C	NRT1	Q08485	598 aa		3.01	□□□□□ -1.93
SRD1	YCR018C	GEP3	Q08622	556 aa		3.01	□□□□□ -1.93
SRD1	YCR018C	MES1	P00958	751 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	APE1	P14904	514 aa		3	□□□□□ -1.93
SRD1	YCR018C	CLB1	P24868	471 aa		3	□□□□□ -1.93
SRD1	YCR018C	RPS2	P25443	254 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	ERG1	P32476	496 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	YME2	P32843	850 aa		3	□□□□□ -1.93
SRD1	YCR018C	SPC34	P36131	295 aa		3	□□□□□ -1.93
SRD1	YCR018C	ARA1	P38115	344 aa		3	□□□□□ -1.93
SRD1	YCR018C	ARC40	P38328	384 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	MET30	P39014	640 aa		3	□□□□□ -1.93
SRD1	YCR018C	YIL169C	P40442	995 aa		3	□□□□□ -1.93
SRD1	YCR018C	ZIM17	P42844	174 aa		3	□□□□□ -1.93
SRD1	YCR018C	SAD1	P43589	448 aa		3	□□□□□ -1.93
SRD1	YCR018C	URB2	P47108	1174 aa		3	□□□□□ -1.93
SRD1	YCR018C	YML6	P51998	286 aa		3	□□□□□ -1.93
SRD1	YCR018C	GPI1	P53306	609 aa		3	□□□□□ -1.93
SRD1	YCR018C	BNI5	P53890	448 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	MPS1	P54199	764 aa		3	□□□□□ -1.93
SRD1	YCR018C	ARX1	Q03862	593 aa	Known RBP	3	□□□□□ -1.93
SRD1	YCR018C	TAP42	Q04372	366 aa		3	□□□□□ -1.93
SRD1	YCR018C	AIM32	Q04689	311 aa		3	□□□□□ -1.93
SRD1	YCR018C	FMP42	Q04991	504 aa		3	□□□□□ -1.93
SRD1	YCR018C	DON1	Q05610	365 aa		3	□□□□□ -1.93
SRD1	YCR018C	YFL068W	P0CX99	160 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	YLL066W-A	P0CY00	160 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	YLL067W-A	P0CY01	160 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	PMS1	P14242	873 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	EXO70	P19658	623 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	FUN19	P28003	413 aa	Predicted RBP	2.99	□□□□□ -1.93
SRD1	YCR018C	YIM1	P28625	365 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	RML2	P32611	393 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	UTR4	P32626	227 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	ECM15	P35195	104 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	VHC1	P38329	1120 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	OSH3	P38713	996 aa	Known RBP	2.99	□□□□□ -1.93
SRD1	YCR018C	YTA12	P40341	825 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	YIL152W	P40455	235 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	CSM2	P40465	213 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	YIR014W	P40570	242 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
SRD1	YCR018C	DRN1	P53255	507 aa	Known RBP	2.99	□□□□□ -1.93
SRD1	YCR018C	SLG1	P54867	378 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	CIK1	Q01649	594 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	SLD5	Q03406	294 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	PHO92	Q06390	306 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	THI20	Q08224	551 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	APL5	Q08951	932 aa	Known RBP	2.99	□□□□□ -1.93
SRD1	YCR018C	LSP1	Q12230	341 aa	Known RBP	2.99	□□□□□ -1.93
SRD1	YCR018C	HSP42	Q12329	375 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	CSR2	Q12734	1121 aa		2.99	□□□□□ -1.93
SRD1	YCR018C	SUC2	P00724	532 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	CAR1	P00812	333 aa	Known RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	YPT1	P01123	206 aa	Known RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	LEU4	P06208	619 aa	Known RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	GPH1	P06738	902 aa	Known RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	SGV1	P23293	657 aa	Known RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	YCR007C	P25354	239 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	ERV1	P27882	189 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	GYP6	P32806	458 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	BZZ1	P38822	633 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	CAK1	P43568	368 aa	Predicted RBP	2.98	□□□□□ -1.93
SRD1	YCR018C	COS5	P47187	383 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	COS7	Q07788	383 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	SRL1	Q08673	210 aa		2.98	□□□□□ -1.93
SRD1	YCR018C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
SRD1	YCR018C	GLK1	P17709	500 aa	Known RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	GLN3	P18494	730 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	ATP10	P18496	279 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	CPR2	P23285	205 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	YCR043C	P25361	127 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	URA7	P28274	579 aa	Known RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	ATP11	P32453	318 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	NIP100	P33420	868 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	RSM22	P36056	628 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	THI2	P38141	450 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	MMS4	P38257	691 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	EFM2	P38347	419 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	YER130C	P39959	443 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	SYG1	P40528	902 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	TES1	P41903	349 aa	Known RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	MEP2	P41948	499 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	DSL1	P53847	754 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	NCS2	P53923	493 aa	Predicted RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	SKO1	Q02100	647 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	HOT1	Q03213	719 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	GYL1	Q04322	720 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	SOV1	Q04748	898 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	MRPL51	Q06090	140 aa	Predicted RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	YLR345W	Q06137	509 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	VPS54	Q12071	889 aa		2.97	□□□□□ -1.93
SRD1	YCR018C	CFT2	Q12102	859 aa	Predicted RBP	2.97	□□□□□ -1.93
SRD1	YCR018C	BRF1	P29056	596 aa		2.96	□□□□□ -1.94
SRD1	YCR018C	FRE1	P32791	686 aa		2.96	□□□□□ -1.94
SRD1	YCR018C	BLI1	P35727	113 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms