RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A PFK2P16862 959 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
VMA9YCL005W-A PHO81P17442 1178 aa2.28□□□□□ -2.04
VMA9YCL005W-A KGD2P19262 463 aaPredicted RBP2.28□□□□□ -2.04
VMA9YCL005W-A OPI1P21957 404 aa2.28□□□□□ -2.04
VMA9YCL005W-A OCA4P25366 362 aa2.28□□□□□ -2.04
VMA9YCL005W-A KRE2P27809 442 aa2.28□□□□□ -2.04
VMA9YCL005W-A MRPL9P31334 269 aa2.28□□□□□ -2.04
VMA9YCL005W-A TPS2P31688 896 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A GCG1P32656 232 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A GYP6P32806 458 aa2.28□□□□□ -2.04
VMA9YCL005W-A ATO2P32907 282 aa2.28□□□□□ -2.04
VMA9YCL005W-A YKL100CP34248 587 aa2.28□□□□□ -2.04
VMA9YCL005W-A HES1P35843 434 aa2.28□□□□□ -2.04
VMA9YCL005W-A MYO3P36006 1272 aa2.28□□□□□ -2.04
VMA9YCL005W-A TEF4P36008 412 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A RCN1P36054 211 aa2.28□□□□□ -2.04
VMA9YCL005W-A HOT13P36078 116 aa2.28□□□□□ -2.04
VMA9YCL005W-A NTR2P36118 322 aaPredicted RBP2.28□□□□□ -2.04
VMA9YCL005W-A ARA1P38115 344 aa2.28□□□□□ -2.04
VMA9YCL005W-A KAP104P38217 918 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A YAP3P38749 330 aa2.28□□□□□ -2.04
VMA9YCL005W-A AIM2P39721 246 aa2.28□□□□□ -2.04
VMA9YCL005W-A RTT105P40063 208 aa2.28□□□□□ -2.04
VMA9YCL005W-A YTA12P40341 825 aa2.28□□□□□ -2.04
VMA9YCL005W-A UBP7P40453 1071 aa2.28□□□□□ -2.04
VMA9YCL005W-A DOT5P40553 215 aa2.28□□□□□ -2.04
VMA9YCL005W-A LYS14P40971 790 aa2.28□□□□□ -2.04
VMA9YCL005W-A COS4P43542 379 aa2.28□□□□□ -2.04
VMA9YCL005W-A SNZ3P43545 298 aa2.28□□□□□ -2.04
VMA9YCL005W-A FAR7P43592 221 aa2.28□□□□□ -2.04
VMA9YCL005W-A BNA1P47096 177 aa2.28□□□□□ -2.04
VMA9YCL005W-A COS5P47187 383 aa2.28□□□□□ -2.04
VMA9YCL005W-A SSN8P47821 323 aa2.28□□□□□ -2.04
VMA9YCL005W-A IMD3P50095 523 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A PSP1P50896 841 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A MIG2P53035 382 aa2.28□□□□□ -2.04
VMA9YCL005W-A IMO32P53219 342 aa2.28□□□□□ -2.04
VMA9YCL005W-A YGR079WP53249 370 aa2.28□□□□□ -2.04
VMA9YCL005W-A COS1P53822 381 aa2.28□□□□□ -2.04
VMA9YCL005W-A SNZ2P53824 298 aa2.28□□□□□ -2.04
VMA9YCL005W-A RPL22BP56628 122 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A DID2P69771 204 aa2.28□□□□□ -2.04
VMA9YCL005W-A UTP6Q02354 440 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A SHR3Q02774 210 aa2.28□□□□□ -2.04
VMA9YCL005W-A INA17Q02888 182 aa2.28□□□□□ -2.04
VMA9YCL005W-A NGL3Q03210 505 aa2.28□□□□□ -2.04
VMA9YCL005W-A ABZ2Q03266 374 aa2.28□□□□□ -2.04
VMA9YCL005W-A ACL4Q03771 387 aa2.28□□□□□ -2.04
VMA9YCL005W-A YDR239CQ03780 787 aa2.28□□□□□ -2.04
VMA9YCL005W-A ATG16Q03818 150 aa2.28□□□□□ -2.04
VMA9YCL005W-A SNX41Q04053 625 aa2.28□□□□□ -2.04
VMA9YCL005W-A URH1Q04179 340 aa2.28□□□□□ -2.04
VMA9YCL005W-A ECI1Q05871 280 aa2.28□□□□□ -2.04
VMA9YCL005W-A ADE13Q05911 482 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A THI7Q05998 598 aa2.28□□□□□ -2.04
VMA9YCL005W-A DXO1Q06349 442 aa2.28□□□□□ -2.04
VMA9YCL005W-A VPS74Q06385 345 aa2.28□□□□□ -2.04
VMA9YCL005W-A YPR091CQ06833 770 aa2.28□□□□□ -2.04
VMA9YCL005W-A CYK3Q07533 885 aa2.28□□□□□ -2.04
VMA9YCL005W-A YDL242WQ07746 117 aa2.28□□□□□ -2.04
VMA9YCL005W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
VMA9YCL005W-A CLP1Q08685 445 aaPredicted RBP2.28□□□□□ -2.04
VMA9YCL005W-A TMA16Q08687 178 aa2.28□□□□□ -2.04
VMA9YCL005W-A RPN8Q08723 338 aaKnown RBP2.28□□□□□ -2.04
VMA9YCL005W-A YPL191CQ08930 360 aa2.28□□□□□ -2.04
VMA9YCL005W-A ATG29Q12092 213 aa2.28□□□□□ -2.04
VMA9YCL005W-A HUA2Q12134 243 aa2.28□□□□□ -2.04
VMA9YCL005W-A LCB4Q12246 624 aa2.28□□□□□ -2.04
VMA9YCL005W-A ARP6Q12509 438 aa2.28□□□□□ -2.04
VMA9YCL005W-A LAG2Q92325 660 aa2.28□□□□□ -2.04
VMA9YCL005W-A YOR111WQ99210 232 aa2.28□□□□□ -2.04
VMA9YCL005W-A TUS1Q06412 1307 aa2.27□□□□□ -2.05
VMA9YCL005W-A RPN13O13563 156 aa2.27□□□□□ -2.05
VMA9YCL005W-A CHO2P05374 869 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A MRP7P12687 371 aa2.27□□□□□ -2.05
VMA9YCL005W-A SPO12P17123 173 aa2.27□□□□□ -2.05
VMA9YCL005W-A NUP1P20676 1076 aa2.27□□□□□ -2.05
VMA9YCL005W-A OSM1P21375 501 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A RVS161P25343 265 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A SPS22P25380 463 aa2.27□□□□□ -2.05
VMA9YCL005W-A URK1P27515 501 aa2.27□□□□□ -2.05
VMA9YCL005W-A IMP2'P32351 346 aa2.27□□□□□ -2.05
VMA9YCL005W-A BEM3P32873 1128 aa2.27□□□□□ -2.05
VMA9YCL005W-A BUD2P33314 1104 aa2.27□□□□□ -2.05
VMA9YCL005W-A AST1P35183 429 aa2.27□□□□□ -2.05
VMA9YCL005W-A YET1P35723 206 aa2.27□□□□□ -2.05
VMA9YCL005W-A MNN2P38069 597 aa2.27□□□□□ -2.05
VMA9YCL005W-A YBR062CP38239 180 aa2.27□□□□□ -2.05
VMA9YCL005W-A YBP1P38315 674 aa2.27□□□□□ -2.05
VMA9YCL005W-A SWC5P38326 303 aa2.27□□□□□ -2.05
VMA9YCL005W-A IMD2P38697 523 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A APE4P38821 490 aa2.27□□□□□ -2.05
VMA9YCL005W-A UTP9P38882 575 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A VMA7P39111 118 aa2.27□□□□□ -2.05
VMA9YCL005W-A YER186CP40101 306 aa2.27□□□□□ -2.05
VMA9YCL005W-A SWM2P40342 146 aa2.27□□□□□ -2.05
VMA9YCL005W-A PFK26P40433 827 aaKnown RBP2.27□□□□□ -2.05
VMA9YCL005W-A SLM1P40485 686 aa2.27□□□□□ -2.05
VMA9YCL005W-A MSS2P40990 351 aa2.27□□□□□ -2.05
VMA9YCL005W-A UFE1P41834 346 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms