RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DTNBO60941 627 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 PPFIA3O75145 1194 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 BMP1P13497 986 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 GNAQP50148 359 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 NTRK3Q16288 839 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 FAM83BQ5T0W9 1011 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
PHGDH-228ENST00000641847 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 KCTD1Q719H9 257 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 ANKRD33Q7Z3H0 272 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
PHGDH-228ENST00000641847 MICALL1Q8N3F8 863 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 SRBD1Q8N5C6 995 aaKnown RBP10.86□□□□□ -0.67
PHGDH-228ENST00000641847 SMARCC2Q8TAQ2 1214 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 PHKBQ93100 1093 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-228ENST00000641847 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
PHGDH-228ENST00000641847 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 STARD7Q9NQZ5 370 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 MUC6Q6W4X9 2439 aa10.86□□□□□ -0.67
PHGDH-228ENST00000641847 TRANK1O15050 2925 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
PHGDH-228ENST00000641847 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-228ENST00000641847 IFNAR1P17181 557 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 VCAM1P19320 739 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 GJB2P29033 226 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 PBX2P40425 430 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 IKQ13123 557 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-228ENST00000641847 ADGRE1Q14246 886 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 ALYREFQ86V81 257 aaKnown RBP10.85□□□□□ -0.67
PHGDH-228ENST00000641847 ABRAQ8N0Z2 381 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 CCDC82Q8N4S0 544 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 SHCBP1Q8NEM2 672 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
PHGDH-228ENST00000641847 SLC26A6Q9BXS9 759 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 MROH8Q9H579 483 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 MYH6P13533 1939 aa10.85□□□□□ -0.67
PHGDH-228ENST00000641847 MYO9BQ13459 2157 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 RLFQ13129 1914 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 IGHA2P01877 340 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 FCER1AP12319 257 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 HMGN5P82970 282 aaKnown RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 SSRP1Q08945 709 aaKnown RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 FUT2Q10981 343 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 COG2Q14746 738 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 SLC35G1Q2M3R5 365 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 PRAMEF19Q5SWL8 479 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 TRIM22Q8IYM9 498 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 MB21D1Q8N884 522 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 FAM184AQ8NB25 1140 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 MOV10L1Q9BXT6 1211 aaKnown RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 RNF26Q9BY78 433 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 ORC3Q9UBD5 711 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-228ENST00000641847 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
PHGDH-228ENST00000641847 hCG_1642624A0A1W2PR95 340 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 MOXD2PA6NHM9 499 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 GRXCR1A8MXD5 290 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 CYTH3O43739 400 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 GPR37L1O60883 481 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 PGK1P00558 417 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 FDPSP14324 419 aaKnown RBP10.83□□□□□ -0.68
PHGDH-228ENST00000641847 AKR1A1P14550 325 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 ERCC3P19447 782 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 SLC16A2P36021 539 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 STAT2P52630 851 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 AKAP17AQ02040 695 aaKnown RBP10.83□□□□□ -0.68
PHGDH-228ENST00000641847 PLS1Q14651 629 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 TMEM240Q5SV17 173 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 NCAPG2Q86XI2 1143 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 PIBF1Q8WXW3 757 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 VTI1AQ96AJ9 217 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 MAML3Q96JK9 1138 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 GLT1D1Q96MS3 346 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 UBA5Q9GZZ9 404 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 EPHX3Q9H6B9 360 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 FEM1BQ9UK73 627 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 COG5Q9UP83 839 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 CNPY2Q9Y2B0 182 aa10.83□□□□□ -0.68
PHGDH-228ENST00000641847 WDFY4Q6ZS81 3184 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 A0A0G2JMZ2 1700 aa10.82□□□□□ -0.68
PHGDH-228ENST00000641847 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
PHGDH-228ENST00000641847 PRPF3O43395 683 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms