RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	SYDE2	Q5VT97	1194 aa		11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	DCAF4	Q8WV16	495 aa		11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	CLEC4D	Q8WXI8	215 aa		11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	ARNTL2	Q8WYA1	636 aa		11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	MTG1	Q9BT17	334 aa	Predicted RBP	11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	POLR3E	Q9NVU0	708 aa		11.78	□□□□□ -0.52
PHGDH-222	ENST00000641587	RBM47	A0AV96	593 aa	Known RBP	11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	ARIH2	O95376	493 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	PFKM	P08237	780 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	IQCF3	P0C7M6	154 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	SUPT20HL2	P0C7V6	817 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	SDS	P20132	328 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	NOV	P48745	357 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	CPT1A	P50416	773 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	CHMP4BP1	P59074	171 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	RRP12	Q5JTH9	1297 aa	Known RBP	11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	SEZ6L	Q9BYH1	1024 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	EPHX3	Q9H6B9	360 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	TOMM22	Q9NS69	142 aa		11.77	□□□□□ -0.53
PHGDH-222	ENST00000641587	LCHN	A4D1U4	455 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	GTPBP6	O43824	516 aa	Predicted RBP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	RPS6	P62753	249 aa	Known RBP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	PDE4D	Q08499	809 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	PPP2R5B	Q15173	497 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	CASC1	Q6TDU7	716 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	BTNL9	Q6UXG8	535 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	HERC6	Q8IVU3	1022 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	SLC9A7	Q96T83	725 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	TMEM47	Q9BQJ4	181 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	GPHN	Q9NQX3	736 aa	Predicted RBP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	ADD3	Q9UEY8	706 aa	Known RBP	11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	BRWD1	Q9NSI6	2320 aa		11.76	□□□□□ -0.53
PHGDH-222	ENST00000641587	ORC4	O43929	436 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	CDC45	O75419	566 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	PDHB	P11177	359 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	ACTN1	P12814	892 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	POU3F3	P20264	500 aa	Predicted RBP	11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	EDNRB	P24530	442 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	GRB10	Q13322	594 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	GPNMB	Q14956	572 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	TCTN1	Q2MV58	587 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	PPP4R3B	Q5MIZ7	849 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	RNF207	Q6ZRF8	634 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	GDPD5	Q8WTR4	605 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	EVI5L	Q96CN4	794 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	FAM122A	Q96E09	287 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	CTAGE1	Q96RT6	745 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	CPVL	Q9H3G5	476 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587	ANAPC4	Q9UJX5	808 aa		11.75	□□□□□ -0.53
PHGDH-222	ENST00000641587		A6NJR5	290 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	PITPNM1	O00562	1244 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	TLL1	O43897	1013 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	LPXN	O60711	386 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	TXN	P10599	105 aa	Known RBP	11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	TOP1	P11387	765 aa	Known RBP	11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	HAND2	P61296	217 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	DEFB103A	P81534	67 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	AAK1	Q2M2I8	961 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	USH1G	Q495M9	461 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	NFRKB	Q6P4R8	1299 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	RETREG2	Q8NC44	543 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	SCFD2	Q8WU76	684 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	FAM227B	Q96M60	508 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587	LRFN3	Q9BTN0	628 aa		11.74	□□□□□ -0.53
PHGDH-222	ENST00000641587		A0A0D9SFI3	127 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	FAM86C2P	A6NEL3	165 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	FGR	P09769	529 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	RFC2	P35250	354 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	WDR5	P61964	334 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	ZNF543	Q08ER8	600 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	GDF6	Q6KF10	455 aa	Predicted RBP	11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	PHOSPHO2	Q8TCD6	241 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	AFG1L	Q8WV93	481 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	TBC1D5	Q92609	795 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	DHX38	Q92620	1227 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	RAD50	Q92878	1312 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	C1QTNF1	Q9BXJ1	281 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	DIAPH3	Q9NSV4	1193 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	MTUS1	Q9ULD2	1270 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	NOD1	Q9Y239	953 aa		11.73	□□□□□ -0.53
PHGDH-222	ENST00000641587	KIAA1217	Q5T5P2	1943 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	LOC102724159	A0A0B4J2E5	919 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	NKRF	O15226	690 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	FGA	P02671	866 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	GOLGA8H	P0CJ92	632 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	BFSP2	Q13515	415 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	PWP2	Q15269	919 aa	Known RBP	11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	PTGIS	Q16647	500 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	LY6K	Q17RY6	165 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	BRDT	Q58F21	947 aa	Predicted RBP	11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	CHST3	Q7LGC8	479 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	TBC1D10C	Q8IV04	446 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	DNER	Q8NFT8	737 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	KAT2B	Q92831	832 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms