RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 ATP2A2P16615 1042 aaKnown RBP21.26■□□□□ 0.99
VPS72-207ENST00000640458 TNFAIP2Q03169 654 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 NECTIN1Q15223 517 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 SEC23AQ15436 765 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 SYDE2Q5VT97 1194 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 RALYLQ86SE5 291 aaKnown RBP21.26■□□□□ 0.99
VPS72-207ENST00000640458 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 WNT8AQ9H1J5 351 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 CERS4Q9HA82 394 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 MTCH2Q9Y6C9 303 aa21.26■□□□□ 0.99
VPS72-207ENST00000640458 CABYRO75952 493 aa21.25■□□□□ 0.99
VPS72-207ENST00000640458 SLC16A2P36021 539 aa21.25■□□□□ 0.99
VPS72-207ENST00000640458 GPATCH4Q5T3I0 446 aaKnown RBP21.25■□□□□ 0.99
VPS72-207ENST00000640458 SCLYQ96I15 445 aa21.25■□□□□ 0.99
VPS72-207ENST00000640458 RANBP17Q9H2T7 1088 aaKnown RBP21.25■□□□□ 0.99
VPS72-207ENST00000640458 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
VPS72-207ENST00000640458 ASTN1O14525 1302 aa21.25■□□□□ 0.99
VPS72-207ENST00000640458 SLC27A2O14975 620 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 SNAP25P60880 206 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 NKX3-2P78367 333 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 TKFCQ3LXA3 575 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 TMEM67Q5HYA8 995 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
VPS72-207ENST00000640458 CREB3L3Q68CJ9 461 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 AGBL1Q96MI9 1066 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 KATNBL1Q9H079 304 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 GRIN2DO15399 1336 aa21.24■□□□□ 0.99
VPS72-207ENST00000640458 B4GALT4O60513 344 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 CA3P07451 260 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 PSMC6P62333 389 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 FSCN1Q16658 493 aaKnown RBP21.23■□□□□ 0.99
VPS72-207ENST00000640458 KRT40Q6A162 431 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 TLK2Q86UE8 772 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 MB21D2Q8IYB1 491 aaPredicted RBP21.23■□□□□ 0.99
VPS72-207ENST00000640458 AP5M1Q9H0R1 490 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 HOMER2Q9NSB8 354 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 COG5Q9UP83 839 aa21.23■□□□□ 0.99
VPS72-207ENST00000640458 IFIT3O14879 490 aaKnown RBP21.22■□□□□ 0.99
VPS72-207ENST00000640458 DYNC1LI2O43237 492 aaPredicted RBP21.22■□□□□ 0.99
VPS72-207ENST00000640458 TLL1O43897 1013 aa21.22■□□□□ 0.99
VPS72-207ENST00000640458 ZEB2O60315 1214 aa21.22■□□□□ 0.99
VPS72-207ENST00000640458 PTGS1P23219 599 aa21.22■□□□□ 0.99
VPS72-207ENST00000640458 TTLL4Q14679 1199 aa21.22■□□□□ 0.99
VPS72-207ENST00000640458 XIRP2A4UGR9 3374 aa21.22■□□□□ 0.99
VPS72-207ENST00000640458 ERICH2A1L162 156 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 FAM86C2PA6NEL3 165 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 EPOPA6NHQ4 379 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 ICAM1P05362 532 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 GOLGA8HP0CJ92 632 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 POU3F3P20264 500 aaPredicted RBP21.21■□□□□ 0.99
VPS72-207ENST00000640458 ASPRV1Q53RT3 343 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 DEFB128Q7Z7B8 93 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 VWCEQ96DN2 955 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 ACAD9Q9H845 621 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 RNF146Q9NTX7 359 aa21.21■□□□□ 0.99
VPS72-207ENST00000640458 GNEQ9Y223 722 aaKnown RBP21.21■□□□□ 0.99
VPS72-207ENST00000640458 REV3LO60673 3130 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 PARP1P09874 1014 aaKnown RBP21.2■□□□□ 0.98
VPS72-207ENST00000640458 ALAS1P13196 640 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 ANTXR2P58335 489 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 SART3Q15020 963 aaKnown RBP21.2■□□□□ 0.98
VPS72-207ENST00000640458 CHST3Q7LGC8 479 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 ARNTL2Q8WYA1 636 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 KHSRPQ92945 711 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPS72-207ENST00000640458 HLA-CQ95604 372 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 TRERF1Q96PN7 1200 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 MTA3Q9BTC8 594 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 SEZ6LQ9BYH1 1024 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 UBA5Q9GZZ9 404 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 PNMA2Q9UL42 364 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 CCPG1Q9ULG6 757 aa21.2■□□□□ 0.98
VPS72-207ENST00000640458 PIEZO1Q92508 2521 aa21.19■□□□□ 0.98
VPS72-207ENST00000640458 SMPD1P17405 629 aa21.19■□□□□ 0.98
VPS72-207ENST00000640458 WTAPQ15007 396 aa21.19■□□□□ 0.98
VPS72-207ENST00000640458 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
VPS72-207ENST00000640458 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
VPS72-207ENST00000640458 DDX49Q9Y6V7 483 aaKnown RBP21.19■□□□□ 0.98
VPS72-207ENST00000640458 MUC6Q6W4X9 2439 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 ASB14A6NK59 587 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 GPR37L1O60883 481 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 PFKMP08237 780 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 FAM133AQ8N9E0 248 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 ALDH8A1Q9H2A2 487 aaPredicted RBP21.18■□□□□ 0.98
VPS72-207ENST00000640458 SENP2Q9HC62 589 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 C11orf16Q9NQ32 467 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 A1CFQ9NQ94 594 aaKnown RBP21.18■□□□□ 0.98
VPS72-207ENST00000640458 LRRC37A2A6NM11 1700 aa21.18■□□□□ 0.98
VPS72-207ENST00000640458 SOWAHBA6NEL2 793 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 PRC1O43663 620 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 CYP2C9P11712 490 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 MCM5P33992 734 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 TSGA10IPQ3SY00 556 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 MUM1L1Q5H9M0 696 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 EEPD1Q7L9B9 569 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 ALYREFQ86V81 257 aaKnown RBP21.17■□□□□ 0.98
VPS72-207ENST00000640458 CPVLQ9H3G5 476 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 PDGFCQ9NRA1 345 aa21.17■□□□□ 0.98
VPS72-207ENST00000640458 TRMT13Q9NUP7 481 aaKnown RBP21.17■□□□□ 0.98
VPS72-207ENST00000640458 WDR19Q8NEZ3 1342 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms