RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 UIMC1Q96RL1 719 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
RTTN-216ENST00000640376 TTYH3Q9C0H2 523 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 ARFGAP3Q9NP61 516 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
RTTN-216ENST00000640376 PNMA6FA0A0J9YX94 578 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RASSF10A6NK89 507 aa10□□□□□ -0.81
RTTN-216ENST00000640376 USP17L10C9JJH3 530 aa10□□□□□ -0.81
RTTN-216ENST00000640376 ERCC3P19447 782 aa10□□□□□ -0.81
RTTN-216ENST00000640376 NFIAQ12857 509 aa10□□□□□ -0.81
RTTN-216ENST00000640376 NCAPH2Q6IBW4 605 aa10□□□□□ -0.81
RTTN-216ENST00000640376 CDC42EP5Q6NZY7 148 aa10□□□□□ -0.81
RTTN-216ENST00000640376 TMC4Q7Z404 712 aa10□□□□□ -0.81
RTTN-216ENST00000640376 KCNK18Q7Z418 384 aa10□□□□□ -0.81
RTTN-216ENST00000640376 KIAA1328Q86T90 577 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RAB34Q9BZG1 259 aa10□□□□□ -0.81
RTTN-216ENST00000640376 ANKZF1Q9H8Y5 726 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
RTTN-216ENST00000640376 SWAP70Q9UH65 585 aa10□□□□□ -0.81
RTTN-216ENST00000640376 TRPC5Q9UL62 973 aaPredicted RBP10□□□□□ -0.81
RTTN-216ENST00000640376 KLRG2A4D1S0 409 aaPredicted RBP10□□□□□ -0.81
RTTN-216ENST00000640376 FAM196BA6NMK8 535 aa10□□□□□ -0.81
RTTN-216ENST00000640376 G3V3G9 751 aa10□□□□□ -0.81
RTTN-216ENST00000640376 ENC1O14682 589 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RHOXF2BP0C7M4 288 aa10□□□□□ -0.81
RTTN-216ENST00000640376 PPP1R2P41236 205 aa10□□□□□ -0.81
RTTN-216ENST00000640376 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
RTTN-216ENST00000640376 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
RTTN-216ENST00000640376 KRT79Q5XKE5 535 aa10□□□□□ -0.81
RTTN-216ENST00000640376 UNC13DQ70J99 1090 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RAD54LQ92698 747 aa10□□□□□ -0.81
RTTN-216ENST00000640376 CUL5Q93034 780 aa10□□□□□ -0.81
RTTN-216ENST00000640376 RHOXF2Q9BQY4 288 aa10□□□□□ -0.81
RTTN-216ENST00000640376 DDX25Q9UHL0 483 aaKnown RBP10□□□□□ -0.81
RTTN-216ENST00000640376 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
RTTN-216ENST00000640376 HLA-DOAP06340 250 aa10□□□□□ -0.81
RTTN-216ENST00000640376 CACNB3P54284 484 aa10□□□□□ -0.81
RTTN-216ENST00000640376 MEA1Q16626 185 aa10□□□□□ -0.81
RTTN-216ENST00000640376 SHROOM1Q2M3G4 852 aaPredicted RBP10□□□□□ -0.81
RTTN-216ENST00000640376 FKBP15Q5T1M5 1219 aa10□□□□□ -0.81
RTTN-216ENST00000640376 PPP1R18Q6NYC8 613 aa10□□□□□ -0.81
RTTN-216ENST00000640376 PNKPQ96T60 521 aa10□□□□□ -0.81
RTTN-216ENST00000640376 ZNHIT6Q9NWK9 470 aaKnown RBP10□□□□□ -0.81
RTTN-216ENST00000640376 SUGT1Q9Y2Z0 365 aa10□□□□□ -0.81
RTTN-216ENST00000640376 C10orf71Q711Q0 1435 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 MARCH6O60337 910 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 AMPD2Q01433 879 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 WHAMMP3Q1A5X7 153 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 GLIS3Q8NEA6 775 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 DDX12PQ92771 950 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 TEKT1Q969V4 418 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 NUP58Q9BVL2 599 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 HAUS4Q9H6D7 363 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 HDAC6Q9UBN7 1215 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 SCN9AQ15858 1988 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 CTAGE15A4D2H0 777 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 CCDC151A5D8V7 595 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 ZBTB5O15062 677 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 CTAGE8P0CG41 777 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 ZBED6P86452 979 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 TCP10Q12799 353 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 TUBB2AQ13885 445 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 LRRC41Q15345 812 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 ECM1Q16610 540 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 LONRF2Q1L5Z9 754 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 COBLL1Q53SF7 1204 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 CENPPQ6IPU0 288 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 CTAGE6Q86UF2 777 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 CTAGE4Q8IX94 777 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 TUBB2BQ9BVA1 445 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 NHEJ1Q9H9Q4 299 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 DBNDD1Q9H9R9 158 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 PCDHAC2Q9Y5I4 1007 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 MYO3BQ8WXR4 1341 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 IPO7O95373 1038 aaKnown RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 CLK2P49760 499 aaKnown RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 TMEM119Q4V9L6 283 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 ZFPM1Q8IX07 1006 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 DNAJC18Q9H819 358 aa9.99□□□□□ -0.81
RTTN-216ENST00000640376 FAM207AQ9NSI2 230 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
RTTN-216ENST00000640376 PVALEFA0A1B0GWK0 134 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 RCCD1A6NED2 376 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 EPHB6O15197 1021 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 ATP1A1P05023 1023 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 SSBP05455 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
RTTN-216ENST00000640376 KRT83P78385 493 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 CYP27A1Q02318 531 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms